(Q44945539)

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Analysis of curated and predicted plastid subproteomes of Arabidopsis. Subcellular compartmentalization leads to distinctive proteome properties

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scholarly article

1 reference

Europe PubMed Central

7 December 2017

Analysis of curated and predicted plastid subproteomes of Arabidopsis. Subcellular compartmentalization leads to distinctive proteome properties (English)

1 reference

Europe PubMed Central

7 December 2017

author name string

Qi Sun

1

1 reference

Europe PubMed Central

7 December 2017

Olof Emanuelsson

2

1 reference

Europe PubMed Central

7 December 2017

Klaas J van Wijk

3

1 reference

Europe PubMed Central

7 December 2017

language of work or name

0 references

publication date

1 June 2004

1 reference

Europe PubMed Central

7 December 2017

number of pages

12

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based on heuristic

inferred from page(s)

Plant Physiology

1 reference

Europe PubMed Central

7 December 2017

135

1 reference

Europe PubMed Central

7 December 2017

2

1 reference

Europe PubMed Central

7 December 2017

723-734

1 reference

Europe PubMed Central

7 December 2017

Crystal structure of spinach major light-harvesting complex at 2.72 A resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Crystal structure of plant photosystem I

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

An atypical haem in the cytochrome b(6)f complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

LumenP—A neural network predictor for protein localization in the thylakoid lumen

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

atTic110 functions as a scaffold for coordinating the stromal events of protein import into chloroplasts.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Achieving the in silico plant. Systems biology and the future of plant biological research

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Tic40, a membrane-anchored co-chaperone homolog in the chloroplast protein translocon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Prediction of the plant beta-barrel proteome: a case study of the chloroplast outer envelope

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Mass spectrometry-based proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Predicting protein subcellular localisation from amino acid sequence information

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Multiple roles of cysteine in biocatalysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

The predicted candidates of Arabidopsis plastid inner envelope membrane proteins and their expression profiles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Integral membrane proteins of the chloroplast envelope: identification and subcellular localization of new transporters.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Photosystem II: a multisubunit membrane protein that oxidises water

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Integral membrane protein biosynthesis: why topology is hard to predict.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

The Pfam protein families database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Prediction of organellar targeting signals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Post-translational protein translocation into thylakoids by the Sec and DeltapH-dependent pathways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Evaluation of methods for the prediction of membrane spanning regions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Whole proteome pI values correlate with subcellular localizations of proteins for organisms within the three domains of life.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Multiple pathways used for the targeting of thylakoid proteins in chloroplasts.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Chloroplast transit peptides: structure, function and evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Transport of proteins into and across the thylakoid membrane

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

A prediction of the size and evolutionary origin of the proteome of chloroplasts of Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Predicting subcellular localization of proteins based on their N-terminal amino acid sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Protein sorting signals and prediction of subcellular localization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

EMBOSS: the European Molecular Biology Open Software Suite

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Pathways for protein disulphide bond formation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

The L18 domain of light-harvesting chlorophyll proteins binds to chloroplast signal recognition particle 43.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Quantitative analysis of complex protein mixtures using isotope-coded affinity tags

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Diagnosis of cellular states of microbial organisms using proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

A neural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Prediction of signal peptides and signal anchors by a hidden Markov model.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Prediction of N-terminal protein sorting signals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

A simple method for displaying the hydropathic character of a protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Sequence logos: a new way to display consensus sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

The 'positive-inside rule' applies to thylakoid membrane proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=514110

3 November 2018

Domain structure of mitochondrial and chloroplast targeting peptides

1 reference

https://pubmed.ncbi.nlm.nih.gov/15208420

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A guide to the Lhc genes and their relatives in Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/15208420

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Predicting the topology of eukaryotic membrane proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/15208420

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reference points for comparisons of two-dimensional maps of proteins from different human cell types defined in a pH scale where isoelectric points correlate with polypeptide compositions

1 reference

https://pubmed.ncbi.nlm.nih.gov/15208420

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1104/PP.104.040717

1 reference

Europe PubMed Central

7 December 2017

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1 reference

Europe PubMed Central

7 December 2017

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