(Q45135419)

9 December 2017

title

Informed and automated k-mer size selection for genome assembly (English)

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9 December 2017

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Rayan Chikhi

1

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9 December 2017

Paul Medvedev

series ordinal

2

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9 December 2017

language of work or name

English

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publication date

3 June 2013

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9 December 2017

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9 December 2017

volume

30

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9 December 2017

issue

1

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9 December 2017

page(s)

31-37

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Limitations of next-generation genome sequence assembly

9 December 2017

cites work

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https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTT310

Short read fragment assembly of bacterial genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTT310

Efficient de novo assembly of single-cell bacterial genomes from short-read data sets

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTT310

Assemblathon 1: a competitive assessment of de novo short read assembly methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTT310

QUAST: quality assessment tool for genome assemblies

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTT310

Phenotypic connections in surprising places

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTT310

Large and linked in scientific publishing

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTT310

A fast, lock-free approach for efficient parallel counting of occurrences of k-mers

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTT310

IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTT310

An Eulerian path approach to DNA fragment assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTT310

Finished bacterial genomes from shotgun sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTT310

DSK: k-mer counting with very low memory usage

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTT310

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTT310

10.1093/BIOINFORMATICS/BTT310

21 January 2018

Identifiers

DOI

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journals/bioinformatics/ChikhiM14

9 December 2017

DBLP publication ID

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DBLP Dataset 2021-01-02

28 January 2021

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