(Q45151208)

English

Fungi evolution revisited: application of the penalized likelihood method to a Bayesian fungal phylogeny provides a new perspective on phylogenetic relationships and divergence dates of Ascomycota groups

scientific article published on 16 May 2005

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scholarly article

1 reference

Europe PubMed Central

10 December 2017

Fungi evolution revisited: application of the penalized likelihood method to a Bayesian fungal phylogeny provides a new perspective on phylogenetic relationships and divergence dates of Ascomycota groups (English)

1 reference

Europe PubMed Central

10 December 2017

1 reference

based on heuristic

inferred from title

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author name string

Ana Carolina B Padovan

1

1 reference

Europe PubMed Central

10 December 2017

Gerdine F O Sanson

2

1 reference

Europe PubMed Central

10 December 2017

Adriana Brunstein

3

1 reference

Europe PubMed Central

10 December 2017

Marcelo R S Briones

4

1 reference

Europe PubMed Central

10 December 2017

publication date

16 May 2005

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Europe PubMed Central

10 December 2017

Journal of Molecular Evolution

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Europe PubMed Central

10 December 2017

60

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Europe PubMed Central

10 December 2017

6

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Europe PubMed Central

10 December 2017

726-735

1 reference

Europe PubMed Central

10 December 2017

https://scigraph.springernature.com/pub.10.1007/s00239-004-0164-y

0 references

Loculoascomycete origins and evolution of filamentous ascomycete morphology based on 18S rRNA gene sequence data

1 reference

https://api.crossref.org/works/10.1007%2FS00239-004-0164-Y

21 January 2018

Estimating divergence times in the presence of an overdispersed molecular clock

1 reference

https://api.crossref.org/works/10.1007%2FS00239-004-0164-Y

21 January 2018

Phylogenetic relationships among ascomycetes: evidence from an RNA polymerse II subunit.

1 reference

https://api.crossref.org/works/10.1007%2FS00239-004-0164-Y

21 January 2018

Estimating divergence dates from molecular sequences

1 reference

https://api.crossref.org/works/10.1007%2FS00239-004-0164-Y

21 January 2018

A Nonparametric Approach to Estimating Divergence Times in the Absence of Rate Constancy

1 reference

https://api.crossref.org/works/10.1007%2FS00239-004-0164-Y

21 January 2018

Estimating absolute rates of molecular evolution and divergence times: a penalized likelihood approach

1 reference

https://api.crossref.org/works/10.1007%2FS00239-004-0164-Y

21 January 2018

Estimation of primate speciation dates using local molecular clocks

1 reference

https://api.crossref.org/works/10.1007%2FS00239-004-0164-Y

21 January 2018

Markov Chasin Monte Carlo Algorithms for the Bayesian Analysis of Phylogenetic Trees

1 reference

https://api.crossref.org/works/10.1007%2FS00239-004-0164-Y

21 January 2018

Determining divergence times of the major kingdoms of living organisms with a protein clock

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

12 December 2020

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Bayes or bootstrap? A simulation study comparing the performance of Bayesian Markov chain Monte Carlo sampling and bootstrapping in assessing phylogenetic confidence

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

12 December 2020

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Major fungal lineages are derived from lichen symbiotic ancestors

1 reference

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A molecular timescale of eukaryote evolution and the rise of complex multicellular life

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Phylogeny of Discomycetes and early radiations of the apothecial Ascomycotina inferred from SSU rDNA sequence data

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

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The neighbor-joining method: a new method for reconstructing phylogenetic trees

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

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Molecular evidence for the early colonization of land by fungi and plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

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Potential applications and pitfalls of Bayesian inference of phylogeny

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

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Estimation of nucleotide substitution rates in Eurotiomycete fungi

1 reference

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Confidence Limits on Phylogenies: an Approach using the Bootstrap

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

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Playing chicken (Gallus gallus): methodological inconsistencies of molecular divergence date estimates due to secondary calibration points.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

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Mass survival of birds across the Cretaceous-Tertiary boundary: molecular evidence.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

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Comparison of Bayesian and maximum likelihood bootstrap measures of phylogenetic reliability.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

12 December 2020

based on heuristic

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Phylogeny of filamentous ascomycetes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

12 December 2020

based on heuristic

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The general stochastic model of nucleotide substitution

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

12 December 2020

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Ribosomal DNA and resolution of branching order among the ascomycota: how many nucleotides are enough?

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

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Detecting morphological convergence in true fungi, using 18S rRNA gene sequence data

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

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The oldest fossil ascomycetes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

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Glomalean Fungi from the Ordovician

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

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Phylogenies from molecular sequences: inference and reliability

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

12 December 2020

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Multiple sequence alignment with Clustal X

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

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Divergence time estimates for the early history of animal phyla and the origin of plants, animals and fungi

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

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Phylogenetic relationships of the dwarf boas and a comparison of Bayesian and bootstrap measures of phylogenetic support.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

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Can fast early rates reconcile molecular dates with the Cambrian explosion?

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https://pubmed.ncbi.nlm.nih.gov/15909224

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MRBAYES: Bayesian inference of phylogenetic trees

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https://pubmed.ncbi.nlm.nih.gov/15909224

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Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

12 December 2020

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New views on fungal evolution based on DNA markers and the fossil record

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

12 December 2020

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Evolutionary relationships within the fungi: analyses of nuclear small subunit rRNA sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/15909224

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1 reference

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Identifiers

10.1007/S00239-004-0164-Y

1 reference

Europe PubMed Central

10 December 2017

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0 references

1 reference

Europe PubMed Central

10 December 2017

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