(Q45944200)

18 December 2017

title

A global regulatory role of gluconeogenic genes in Escherichia coli revealed by transcriptome network analysis. (English)

1 reference

18 December 2017

0 references

0 references

1

1 reference

18 December 2017

author name string

Linh M Tran

series ordinal

2

1 reference

18 December 2017

James C Liao

series ordinal

3

1 reference

18 December 2017

language of work or name

English

0 references

publication date

31 August 2005

1 reference

18 December 2017

Journal of Biological Chemistry

number of pages

9

1 reference

based on heuristic

inferred from page(s)

published in

1 reference

18 December 2017

volume

280

1 reference

18 December 2017

issue

43

1 reference

18 December 2017

page(s)

36079-36087

1 reference

18 December 2017

https://api.crossref.org/works/10.1074%2FJBC.M508202200

1 reference

Transcriptome-based determination of multiple transcription regulator activities in Escherichia coli by using network component analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Integration host factor amplifies the induction of the aceBAK operon of Escherichia coli by relieving IclR repression

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Two different modes of transcription repression of the Escherichia coli acetate operon by IclR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Gene expression profiling by DNA microarrays and metabolic fluxes in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Network component analysis: reconstruction of regulatory signals in biological systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

gNCA: a framework for determining transcription factor activity based on transcriptome: identifiability and numerical implementation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Global expression profiling of acetate-grown Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Molecular cloning of the plasmid RP4 primase region in a multi-host-range tacP expression vector

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

A Software Package for cDNA Microarray Data Normalization and Assessing Confidence Intervals

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Issues in cDNA microarray analysis: quality filtering, channel normalization, models of variations and assessment of gene effects

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

RegulonDB (version 3.2): transcriptional regulation and operon organization in Escherichia coli K-12

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Regulation of acetate metabolism by protein phosphorylation in enteric bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Pyruvate metabolism and the phosphorylation state of isocitrate dehydrogenase in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Pathway analysis, engineering, and physiological considerations for redirecting central metabolism.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

The gene yjcG, cotranscribed with the gene acs, encodes an acetate permease in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Sir2-dependent activation of acetyl-CoA synthetase by deacetylation of active lysine

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Identification of the protein acetyltransferase (Pat) enzyme that acetylates acetyl-CoA synthetase in Salmonella enterica

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Dps protects cells against multiple stresses during stationary phase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

The dps promoter is activated by OxyR during growth and by IHF and σs in stationary phase

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Synthesis of the stationary-phase sigma factor sigma s is positively regulated by ppGpp

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Control of rRNA expression by small molecules is dynamic and nonredundant

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

The cellular concentration of the sigma S subunit of RNA polymerase in Escherichia coli is controlled at the levels of transcription, translation, and protein stability

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Regulation of RNA polymerase sigma subunit synthesis in Escherichia coli: intracellular levels of four species of sigma subunit under various growth conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Dramatic changes in Fis levels upon nutrient upshift in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Stimulation of glucose catabolism in Escherichia coli by a potential futile cycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Regulation of malate dehydrogenase (mdh) gene expression in Escherichia coli in response to oxygen, carbon, and heme availability

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Identification of the CRP regulon using in vitro and in vivo transcriptional profiling

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Regulation of acetyl coenzyme A synthetase in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

Cyclic AMP receptor protein-dependent activation of the Escherichia coli acsP2 promoter by a synergistic class III mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M508202200

21 January 2018

Identifiers

DOI

10.1074/JBC.M508202200

1 reference

18 December 2017

PubMed ID

16141204

1 reference

18 December 2017