(Q45989252)

18 December 2017

title

Chromatin and DNA modifications in the Opaque2-mediated regulation of gene transcription during maize endosperm development. (English)

1 reference

18 December 2017

author name string

Sabrina Locatelli

1

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18 December 2017

Paolo Piatti

2

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18 December 2017

Mario Motto

3

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18 December 2017

Vincenzo Rossi

4

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18 December 2017

publication date

29 May 2009

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18 December 2017

published in

The Plant Cell

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18 December 2017

volume

21

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18 December 2017

issue

5

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18 December 2017

page(s)

1410-1427

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18 December 2017

Developmental and environmental signals induce distinct histone acetylation profiles on distal and proximal promoter elements of the C4-Pepc gene in maize

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Developmental information but not promoter activity controls the methylation state of histone H3 lysine 4 on two photosynthetic genes in maize

29 September 2018

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29 September 2018

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The Arabidopsis homologs of trithorax (ATX1) and enhancer of zeste (CLF) establish 'bivalent chromatin marks' at the silent AGAMOUS locus

29 September 2018

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29 September 2018

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The triploid endosperm genome of Arabidopsis adopts a peculiar, parental-dosage-dependent chromatin organization

29 September 2018

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The complex language of chromatin regulation during transcription

29 September 2018

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Maize histone deacetylase hda101 is involved in plant development, gene transcription, and sequence-specific modulation of histone modification of genes and repeats

29 September 2018

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Vernalization: a model for investigating epigenetics and eukaryotic gene regulation in plants.

29 September 2018

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The role of chromatin during transcription

29 September 2018

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Chromatin modifications and their function

29 September 2018

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Epigenetics: a landscape takes shape

29 September 2018

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Both introns and long 3'-UTRs operate as cis-acting elements to trigger nonsense-mediated decay in plants

29 September 2018

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Epigenetic asymmetry of imprinted genes in plant gametes.

29 September 2018

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Contribution of the histone H3 and H4 amino termini to Gcn4p- and Gcn5p-mediated transcription in yeast

29 September 2018

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Ordered histone modifications are associated with transcriptional poising and activation of the phaseolin promoter

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Single-nucleosome mapping of histone modifications in S. cerevisiae

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Interaction of maize Opaque-2 and the transcriptional co-activators GCN5 and ADA2, in the modulation of transcriptional activity.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

PAF1-complex-mediated histone methylation of FLOWERING LOCUS C chromatin is required for the vernalization-responsive, winter-annual habit in Arabidopsis.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Multiple pathways in the decision to flower: enabling, promoting, and resetting

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Extensive maternal DNA hypomethylation in the endosperm of Zea mays.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Expression profile and cellular localization of maize Rpd3-type histone deacetylases during plant development

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Gene expression of a gene family in maize based on noncollinear haplotypes

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

The Paf1 complex is required for histone H3 methylation by COMPASS and Dot1p: linking transcriptional elongation to histone methylation

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

A multiplicity of coactivators is required by Gcn4p at individual promoters in vivo

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Alteration of GCN5 levels in maize reveals dynamic responses to manipulating histone acetylation

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Contiguous genomic DNA sequence comprising the 19-kD zein gene family from maize

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Deciphering the transcriptional histone acetylation code for a human gene

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Maize opaque endosperm mutations create extensive changes in patterns of gene expression.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

The histone variant H3.3 marks active chromatin by replication-independent nucleosome assembly

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Plant chromatin: development and gene control

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Sequence, regulation, and evolution of the maize 22-kD alpha zein gene family

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Quantification of DNaseI-sensitivity by real-time PCR: quantitative analysis of DNaseI-hypersensitivity of the mouse beta-globin LCR

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Methylation of the Opaque2 box in zein genes is parent-dependent and affects O2 DNA binding activity in vitro

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Chromatin structure and phaseolin gene regulation.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Chromatin remodeling enzymes: who's on first?

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Ectopic hypermethylation of flower-specific genes in Arabidopsis

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

The language of covalent histone modifications

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

The role of opaque2 in the control of lysine-degrading activities in developing maize endosperm.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Characterization of the maize prolamin box-binding factor-1 (PBF-1) and its role in the developmental regulation of the zein multigene family.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

A maize zinc-finger protein binds the prolamin box in zein gene promoters and interacts with the basic leucine zipper transcriptional activator Opaque2.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

The role of multiple binding sites in the activation of zein gene expression by Opaque-2.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Differential stability of zein mRNA in developing corn kernel.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Regulation of cytosolic pyruvate, orthophosphate dikinase expression in developing maize endosperm.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Transcriptional characterization of an alpha-zein gene cluster in maize.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

OHP1: a maize basic domain/leucine zipper protein that interacts with opaque2.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Genes encoding actin in higher plants: intron positions are highly conserved but the coding sequences are not.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Two adjacent genomic zein sequences: Structure, organization and tissue-specific restriction pattern

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

The O2 gene which regulates zein deposition in maize endosperm encodes a protein with structural homologies to transcriptional activators

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Maize regulatory gene opaque-2 encodes a protein with a "leucine-zipper" motif that binds to zein DNA.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

The maize regulatory locus Opaque-2 encodes a DNA-binding protein which activates the transcription of the b-32 gene

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Molecular mechanisms underlying the differential expression of maize pyruvate, orthophosphate dikinase genes

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Opaque-2 is a transcriptional activator that recognizes a specific target site in 22-kD zein genes

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2700540

Molecular analysis of opaque-2 alleles from Zea mays L. reveals the nature of mutational events and the presence of a hypervariable region in the 5' part of the gene

29 September 2018

1 reference

12 December 2020

The transcriptional activator Opaque-2 controls the expression of a cytosolic form of pyruvate orthophosphate dikinase-1 in maize endosperms

1 reference

12 December 2020

DNase I hypersensitivity and expression of the Shrunken-1 gene of maize

1 reference

12 December 2020

Maternal-specific demethylation and expression of specific alleles of zein genes in the endosperm of Zea mays L

1 reference

12 December 2020

Tissue-specific DNase I-sensitive sites of the maize P gene and their changes upon epimutation

1 reference

12 December 2020

Transposon tagging and molecular analysis of the maize regulatory locus opaque-2

1 reference

12 December 2020

Functional expression of the transcriptional activator Opaque-2 of Zea mays in transformed yeast

1 reference

12 December 2020

Differences in cell type-specific expression of the gene Opaque 2 in maize and transgenic tobacco

1 reference

12 December 2020

Analysis of the methylation pattern of the maize opaque-2 (O2) promoter and in vitro binding studies indicate that the O2 B-Zip protein and other endosperm factors can bind to methylated target sequences

1 reference

12 December 2020

Transcription in Isolated Wheat Nuclei: I. ISOLATION OF NUCLEI AND ELIMINATION OF ENDOGENOUS RIBONUCLEASE ACTIVITY

1 reference

12 December 2020

The epigenetic landscape of plants

1 reference

12 December 2020

The opaque-2 mutation of maize differentially reduces zein gene transcription

1 reference

12 December 2020

Identifiers

DOI

10.1105/TPC.109.067256

1 reference

18 December 2017

PMC publication ID

2700540

0 references

1 reference

18 December 2017