(Q46049021)

19 December 2017

title

An evaluation of chemical shift index-based secondary structure determination in proteins: influence of random coil chemical shifts (English)

1 reference

19 December 2017

0 references

0 references

S P Mielke

1

1 reference

19 December 2017

V V Krishnan

series ordinal

2

1 reference

19 December 2017

publication date

1 October 2004

1 reference

19 December 2017

Journal of Biomolecular NMR

published in

1 reference

19 December 2017

volume

30

1 reference

19 December 2017

issue

2

1 reference

19 December 2017

page(s)

143-153

1 reference

19 December 2017

https://scigraph.springernature.com/pub.10.1023/b:jnmr.0000048940.51331.49

exact match

0 references

cites work

Investigation of the neighboring residue effects on protein chemical shifts

1 reference

12 December 2020

1H, 13C and 15N chemical shift referencing in biomolecular NMR

1 reference

12 December 2020

Direct measurement of angles between bond vectors in high-resolution NMR.

1 reference

12 December 2020

Protein backbone angle restraints from searching a database for chemical shift and sequence homology

1 reference

12 December 2020

'Random coil' 1H chemical shifts obtained as a function of temperature and trifluoroethanol concentration for the peptide series GGXGG.

1 reference

12 December 2020

Protein secondary structure from circular dichroism spectroscopy. Combining variable selection principle and cluster analysis with neural network, ridge regression and self-consistent methods.

1 reference

12 December 2020

Application of 1H NMR chemical shifts to measure the quality of protein structures

1 reference

12 December 2020

The effects of guanidine hydrochloride on the 'random coil' conformations and NMR chemical shifts of the peptide series GGXGG

1 reference

12 December 2020

The use of chemical shifts and their anisotropies in biomolecular structure determination

1 reference

12 December 2020

Chemical shifts and three-dimensional protein structures

1 reference

12 December 2020

The Protein Data Bank

1 reference

12 December 2020

RefDB: a database of uniformly referenced protein chemical shifts

1 reference

12 December 2020

Secondary-structure dependent chemical shifts in proteins

1 reference

12 December 2020

Random-coil chemical shifts of phosphorylated amino acids.

1 reference

12 December 2020

Secondary structure of proteins and three-dimensional pattern recognition.

1 reference

12 December 2020

Structural information from NMR secondary chemical shifts of peptide alpha C-H protons in proteins.

1 reference

12 December 2020

Simple techniques for the quantification of protein secondary structure by1H NMR spectroscopy

1 reference

12 December 2020

Characterization of the three-dimensional solution structure of human profilin: 1H, 13C, and 15N NMR assignments and global folding pattern

1 reference

12 December 2020

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

1 reference

12 December 2020

Secondary structure of M13 coat protein in phospholipids studied by circular dichroism, Raman, and Fourier transform infrared spectroscopy

1 reference

12 December 2020

Structural analysis of silk with 13C NMR chemical shift contour plots

1 reference

12 December 2020

The 13C chemical shifts of amino acids in aqueous solution containing organic solvents: application to the secondary structure characterization of peptides in aqueous trifluoroethanol solution

1 reference

12 December 2020

Interpretation of chemical shifts and coupling constants in macromolecules

1 reference

12 December 2020

Effects of amino acid phi,psi propensities and secondary structure interactions in modulating H alpha chemical shifts in peptide and protein beta-sheet.

1 reference

12 December 2020

PROMOTIF--a program to identify and analyze structural motifs in proteins

1 reference

12 December 2020

Evaluation and improvement of multiple sequence methods for protein secondary structure prediction.

1 reference

12 December 2020

The 13C chemical-shift index: a simple method for the identification of protein secondary structure using 13C chemical-shift data

1 reference

12 December 2020

Random coil chemical shifts in acidic 8 M urea: implementation of random coil shift data in NMRView

1 reference

12 December 2020

Chemical shifts as a tool for structure determination

1 reference

12 December 2020

Automated probabilistic method for assigning backbone resonances of (13C,15N)-labeled proteins.

1 reference

12 December 2020

The chemical shift index: a fast and simple method for the assignment of protein secondary structure through NMR spectroscopy

1 reference

12 December 2020

The Protein Data Bank: a computer-based archival file for macromolecular structures

1 reference

12 December 2020

A Potential Involving Multiple Proton Chemical-Shift Restraints for Nonstereospecifically Assigned Methyl and Methylene Protons

1 reference

12 December 2020

Relationship between nuclear magnetic resonance chemical shift and protein secondary structure

1 reference

12 December 2020

A relational database for sequence-specific protein NMR data

1 reference

12 December 2020

1H, 13C and 15N random coil NMR chemical shifts of the common amino acids. I. Investigations of nearest-neighbor effects

1 reference

12 December 2020

Chemical shifts in amino acids, peptides, and proteins: from quantum chemistry to drug design

1 reference

12 December 2020

Knowledge-based protein secondary structure assignment

1 reference

12 December 2020

The impact of direct refinement against 13C alpha and 13C beta chemical shifts on protein structure determination by NMR.

1 reference

12 December 2020

The impact of direct refinement against proton chemical shifts on protein structure determination by NMR.

1 reference

12 December 2020

A pentapeptide-based method for protein secondary structure prediction

1 reference

12 December 2020

NMR chemical shifts and structure refinement in proteins.

1 reference

12 December 2020

Use of chemical shifts in macromolecular structure determination

1 reference

12 December 2020

Probability-based protein secondary structure identification using combined NMR chemical-shift data

1 reference

12 December 2020

Identification of structural motifs from protein coordinate data: secondary structure and first-level supersecondary structure

1 reference

12 December 2020

Use of chemical shifts and coupling constants in nuclear magnetic resonance structural studies on peptides and proteins

1 reference

12 December 2020

Sequence-dependent correction of random coil NMR chemical shifts

1 reference

12 December 2020

Protein structural class identification directly from NMR spectra using averaged chemical shifts

1 reference

12 December 2020

An empirical correlation between secondary structure content and averaged chemical shifts in proteins

1 reference

12 December 2020

Protein chemical shift analysis: a practical guide

1 reference

12 December 2020

10.1023/B:JNMR.0000048940.51331.49

Identifiers

DOI

1 reference

19 December 2017

Dimensions Publication ID

0 references

1 reference

19 December 2017