(Q46286448)

21 December 2017

title

Elucidation of the protein folding landscape by NMR. (English)

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21 December 2017

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1

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21 December 2017

Peter Wright

series ordinal

2

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21 December 2017

language of work or name

English

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publication date

1 January 2005

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21 December 2017

published in

Methods in Enzymology

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21 December 2017

volume

394

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21 December 2017

page(s)

299-321

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21 December 2017

Molecular alignment of denatured states of staphylococcal nuclease with strained polyacrylamide gels and surfactant liquid crystalline phases

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Backbone dynamics of a highly disordered 131 residue fragment of staphylococcal nuclease

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Variation of molecular alignment as a means of resolving orientational ambiguities in protein structures from dipolar couplings

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Following protein folding in real time using NMR spectroscopy

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Protein folding monitored at individual residues during a two-dimensional NMR experiment

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7 January 2021

Detection of residue contacts in a protein folding intermediate

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Unfolded proteins studied by Raman optical activity

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Weak alignment offers new NMR opportunities to study protein structure and dynamics.

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Random-coil chemical shifts of phosphorylated amino acids.

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7 January 2021

Structural characterization of unfolded states of apomyoglobin using residual dipolar couplings

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7 January 2021

Sequence-Corrected 15N "Random Coil" Chemical Shifts

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7 January 2021

Protein folding mechanisms: new methods and emerging ideas

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Combined frequency- and time-domain NMR spectroscopy. Application to fast protein resonance assignment.

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7 January 2021

Funnels, pathways, and the energy landscape of protein folding: a synthesis

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7 January 2021

Main-chain dynamics of a partially folded protein: 15N NMR relaxation measurements of hen egg white lysozyme denatured in trifluoroethanol

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7 January 2021

Backbone dynamics of the natively unfolded pro-peptide of subtilisin by heteronuclear NMR relaxation studies

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7 January 2021

Rapid formation of non-native contacts during the folding of HPr revealed by real-time photo-CIDNP NMR and stopped-flow fluorescence experiments

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7 January 2021

Probing Residual Interactions in Unfolded Protein States Using NMR Spin Relaxation Techniques: An Application to Δ131Δ

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7 January 2021

Side chain dynamics in unfolded protein states: an NMR based 2H spin relaxation study of delta131delta

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7 January 2021

Understanding protein folding via free-energy surfaces from theory and experiment

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7 January 2021

Protein folding and misfolding

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7 January 2021

Kinetic studies of protein folding using NMR spectroscopy.

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7 January 2021

Nuclear magnetic resonance methods for elucidation of structure and dynamics in disordered states

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7 January 2021

Coupling of folding and binding for unstructured proteins

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7 January 2021

Insights into the structure and dynamics of unfolded proteins from nuclear magnetic resonance

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7 January 2021

Unfolded proteins and protein folding studied by NMR.

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7 January 2021

Native and non-native secondary structure and dynamics in the pH 4 intermediate of apomyoglobin

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7 January 2021

Spectral density function mapping using 15N relaxation data exclusively

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7 January 2021

Toward a Description of the Conformations of Denatured States of Proteins. Comparison of a Random Coil Model with NMR Measurements

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Short-range, long-range and transition state interactions in the denatured state of ACBP from residual dipolar couplings

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

What fluorescence correlation spectroscopy can tell us about unfolded proteins

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Characterization of long-range structure in the denatured state of staphylococcal nuclease. I. Paramagnetic relaxation enhancement by nitroxide spin labels

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Characterization of long-range structure in the denatured state of staphylococcal nuclease. II. Distance restraints from paramagnetic relaxation and calculation of an ensemble of structures

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Submillisecond folding of monomeric lambda repressor

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Recognition of the mRNA AU-rich element by the zinc finger domain of TIS11d

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Extending the range of amide proton relaxation dispersion experiments in proteins using a constant-time relaxation-compensated CPMG approach

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7 January 2021

A study of the NH NMR signals of Gly-Gly-X-Ala tetrapeptides in H2O at low temperature

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7 January 2021

Unfolded peptides and proteins studied with infrared absorption and vibrational circular dichroism spectra

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7 January 2021

Close identity of a pressure-stabilized intermediate with a kinetic intermediate in protein folding

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7 January 2021

High pressure NMR reveals that apomyoglobin is an equilibrium mixture from the native to the unfolded.

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7 January 2021

Low-populated folding intermediates of Fyn SH3 characterized by relaxation dispersion NMR.

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7 January 2021

Two-dimensional 1H NMR of three spin-labeled derivatives of bovine pancreatic trypsin inhibitor

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7 January 2021

Locally disordered conformer of the hamster prion protein: a crucial intermediate to PrPSc?

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7 January 2021

Slow conformational dynamics in the hamster prion protein.

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7 January 2021

Pressure-induced unfolding of the molten globule of all-Ala alpha-lactalbumin

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7 January 2021

Mapping long-range contacts in a highly unfolded protein

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7 January 2021

On the origin of residual dipolar couplings from denatured proteins

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7 January 2021

Two-Dimensional15N−1H Photo-CIDNP as a Surface Probe of Native and Partially Structured Proteins

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7 January 2021

Residual dipolar couplings in nucleic acid structure determination

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

'Random coil' 1H chemical shifts obtained as a function of temperature and trifluoroethanol concentration for the peptide series GGXGG.

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Deuterium spin probes of side-chain dynamics in proteins. 1. Measurement of five relaxation rates per deuteron in (13)C-labeled and fractionally (2)H-enriched proteins in solution

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Toward a taxonomy of the denatured state: small angle scattering studies of unfolded proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Rapid sample-mixing technique for transient NMR and photo-CIDNP spectroscopy: applications to real-time protein folding

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Specific (15)N, NH correlations for residues in(15) N, (13)C and fractionally deuterated proteins that immediately follow methyl-containing amino acids.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Measurement of slow (micros-ms) time scale dynamics in protein side chains by (15)N relaxation dispersion NMR spectroscopy: application to Asn and Gln residues in a cavity mutant of T4 lysozyme.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Slow internal dynamics in proteins: application of NMR relaxation dispersion spectroscopy to methyl groups in a cavity mutant of T4 lysozyme

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Dynamics of methyl groups in proteins as studied by proton-detected 13C NMR spectroscopy. Application to the leucine residues of staphylococcal nuclease

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Decreased thermodynamic stability as a crucial factor for familial amyloidotic polyneuropathy

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Pressure-dissociable reversible assembly of intrinsically denatured lysozyme is a precursor for amyloid fibrils

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Direct demonstration of structural similarity between native and denatured eglin C.

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7 January 2021

Toward an outline of the topography of a realistic protein-folding funnel

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7 January 2021

Nuclear magnetic resonance methods for quantifying microsecond-to-millisecond motions in biological macromolecules

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7 January 2021

The effects of guanidine hydrochloride on the 'random coil' conformations and NMR chemical shifts of the peptide series GGXGG

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7 January 2021

New techniques in structural NMR--anisotropic interactions.

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7 January 2021

Pressure-dependent changes in the solution structure of hen egg-white lysozyme

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Hydrophobicity of amino acid residues in globular proteins.

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7 January 2021

Solution NMR of proteins within polyacrylamide gels: diffusional properties and residual alignment by mechanical stress or embedding of oriented purple membranes

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Distance measurements in spin-labeled lysozyme

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Random coil chemical shifts in acidic 8 M urea: implementation of random coil shift data in NMRView

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7 January 2021

Sequence-dependent correction of random coil NMR chemical shifts

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7 January 2021

Molecular hinges in protein folding: the urea-denatured state of apomyoglobin

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7 January 2021

Comparison between the phi distribution of the amino acids in the protein database and NMR data indicates that amino acids have various phi propensities in the random coil conformation

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7 January 2021

Persistence of native-like topology in a denatured protein in 8 M urea

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7 January 2021

Probing slow time scale dynamics at methyl-containing side chains in proteins by relaxation dispersion NMR measurements: application to methionine residues in a cavity mutant of T4 lysozyme

1 reference

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7 January 2021

The 13C chemical shifts of amino acids in aqueous solution containing organic solvents: application to the secondary structure characterization of peptides in aqueous trifluoroethanol solution

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7 January 2021

Establishing a degree of order: obtaining high-resolution NMR structures from molecular alignment

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Direct measurement of distances and angles in biomolecules by NMR in a dilute liquid crystalline medium

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Slow dynamics in folded and unfolded states of an SH3 domain

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7 January 2021

Dipolar couplings as a probe of molecular dynamics and structure in solution

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7 January 2021

Nuclear magnetic dipole interactions in field-oriented proteins: information for structure determination in solution

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7 January 2021

Assessment of zinc finger orientations by residual dipolar coupling constants

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Alignment of Biopolymers in Strained Gels: A New Way To Create Detectable Dipole−Dipole Couplings in High-Resolution Biomolecular NMR

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Three key residues form a critical contact network in a protein folding transition state

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Investigation of the neighboring residue effects on protein chemical shifts

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Side-chains in native and random coil protein conformations. Analysis of NMR coupling constants and chi1 torsion angle preferences.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Millisecond Time Resolved Photo-CIDNP NMR Reveals a Non-Native Folding Intermediate on the Ion-Induced Refolding Pathway of Bovine α-Lactalbumin

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7 January 2021

1H, 13C and 15N random coil NMR chemical shifts of the common amino acids. I. Investigations of nearest-neighbor effects

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7 January 2021

Overall structure and sugar dynamics of a DNA dodecamer from homo- and heteronuclear dipolar couplings and 31P chemical shift anisotropy

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

A study of protein side-chain dynamics from new 2H auto-correlation and 13C cross-correlation NMR experiments: application to the N-terminal SH3 domain from drk.

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Chemical shift dispersion and secondary structure prediction in unfolded and partly folded proteins

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

NMR structural and dynamic characterization of the acid-unfolded state of apomyoglobin provides insights into the early events in protein folding

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Triple-resonance NOESY-based experiments with improved spectral resolution: applications to structural characterization of unfolded, partially folded and folded proteins

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https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

Comprehensive NOE characterization of a partially folded large fragment of staphylococcal nuclease Delta131Delta, using NMR methods with improved resolution.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2805%2994011-1

7 January 2021

10.1016/S0076-6879(05)94011-1

Identifiers

DOI

1 reference

21 December 2017

PubMed ID

15808225

1 reference

21 December 2017