(Q46293892)

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Large Variation in the Ratio of Mitochondrial to Nuclear Mutation Rate across Animals: Implications for Genetic Diversity and the Use of Mitochondrial DNA as a Molecular Marker

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Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/28981721

Large Variation in the Ratio of Mitochondrial to Nuclear Mutation Rate across Animals: Implications for Genetic Diversity and the Use of Mitochondrial DNA as a Molecular Marker (English)

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/28981721

mitochondrial DNA

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genetic diversity

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based on heuristic

inferred from title

author name string

Remi Allio

1

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/28981721

Stefano Donega

2

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/28981721

Nicolas Galtier

3

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/28981721

Benoit Nabholz

4

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/28981721

publication date

16 July 2017

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/28981721

Molecular Biology and Evolution

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/28981721

34

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/28981721

11

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/28981721

2762-2772

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/28981721

The incomplete natural history of mitochondria

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Mitogenomic data resolve basal relationships among passeriform and passeridan birds

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Population size does not influence mitochondrial genetic diversity in animals

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Low mitochondrial variability in birds may indicate Hill-Robertson effects on the W chromosome.

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Effects of linkage on rates of molecular evolution

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Substitution bias, rapid saturation, and the use of mtDNA for nematode systematics

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Next-generation sequencing and phylogenetic signal of complete mitochondrial genomes for resolving the evolutionary history of leaf-nosed bats (Phyllostomidae).

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Why do species vary in their rate of molecular evolution?

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Determinants of rate variation in mammalian DNA sequence evolution

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Patterns of mitochondrial versus nuclear DNA sequence divergence among nymphalid butterflies: the utility of wingless as a source of characters for phylogenetic inference

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Rapid evolution of animal mitochondrial DNA

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Evolutionary relationships, species delimitation and biogeography of Eastern Afromontane horned chameleons (Chamaeleonidae: Trioceros)

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Hearing silence: non-neutral evolution at synonymous sites in mammals

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Biopython: freely available Python tools for computational molecular biology and bioinformatics

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

OrthoMaM v8: a database of orthologous exons and coding sequences for comparative genomics in mammals

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Biased gene conversion and the evolution of mammalian genomic landscapes

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Limited performance of DNA barcoding in a diverse community of tropical butterflies.

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Determinants of genetic diversity

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Mutation rate variation in the mammalian genome

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Rodents of the Caribbean: origin and diversification of hutias unravelled by next-generation museomics

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Mitochondrial DNA as a marker of molecular diversity: a reappraisal.

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

IS THE POPULATION SIZE OF A SPECIES RELEVANT TO ITS EVOLUTION?

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Bio++: efficient extensible libraries and tools for computational molecular evolution.

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

The Roles of Mutation, Selection, and Expression in Determining Relative Rates of Evolution in Mitochondrial versus Nuclear Genomes

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

The promise of DNA barcoding for taxonomy

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

No variation and low synonymous substitution rates in coral mtDNA despite high nuclear variation

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Substantial incongruence among the morphology, taxonomy, and molecular phylogeny of the land snails Aegista, Landouria, Trishoplita, and Pseudobuliminus (Pulmonata: Bradybaenidae) occurring in East Asia.

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Variation in the mutation rate across mammalian genomes

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Slow mitochondrial COI sequence evolution at the base of the metazoan tree and its implications for DNA barcoding

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Problems with mitochondrial DNA as a marker in population, phylogeographic and phylogenetic studies: the effects of inherited symbionts

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

The rate of adaptive evolution in animal mitochondria.

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Whole-genome analyses resolve early branches in the tree of life of modern birds

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Evolutionary Rate at the Molecular Level

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Evolution of the mutation rate

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Mutation pressure and the evolution of organelle genomic architecture

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Mean mass-specific metabolic rates are strikingly similar across life's major domains: Evidence for life's metabolic optimum

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Rates of mitochondrial DNA evolution in sharks are slow compared with mammals

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

The hitch-hiking effect of a favourable gene

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

DNA barcoding and taxonomy in Diptera: a tale of high intraspecific variability and low identification success

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Gene Tree Discordance Causes Apparent Substitution Rate Variation

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Mitochondrial dynamics and inheritance during cell division, development and disease

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Comment on "Population size does not influence mitochondrial genetic diversity in animals".

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

The erratic mitochondrial clock: variations of mutation rate, not population size, affect mtDNA diversity across birds and mammals

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Body mass-corrected molecular rate for bird mitochondrial DNA.

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Determination of mitochondrial genetic diversity in mammals

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Rapidly evolving mitochondrial genome and directional selection in mitochondrial genes in the parasitic wasp nasonia (hymenoptera: pteromalidae).

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

The phylogenetic utility of acetyltransferase (ARD1) and glutaminyl tRNA synthetase (QtRNA) for reconstructing Cenozoic relationships as exemplified by the large Australian cicada Pauropsalta generic complex

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21 January 2018

Evidence for variation in the effective population size of animal mitochondrial DNA

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Accumulation of slightly deleterious mutations in mitochondrial protein-coding genes of large versus small mammals

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Rates of nucleotide substitution in Drosophila mitochondrial DNA and nuclear DNA are similar

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

MACSE: Multiple Alignment of Coding SEquences accounting for frameshifts and stop codons

1 reference

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21 January 2018

Multilocus species tree analyses resolve the radiation of the widespread Bufo bufo species group (Anura, Bufonidae).

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Comparative population genomics in animals uncovers the determinants of genetic diversity.

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Shedding Light on the Grey Zone of Speciation along a Continuum of Genomic Divergence

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Slow mitochondrial DNA sequence evolution in the Anthozoa (Cnidaria).

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Direct estimate of the rate of germline mutation in a bird

1 reference

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21 January 2018

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

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21 January 2018

Human Ageing Genomic Resources: integrated databases and tools for the biology and genetics of ageing

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21 January 2018

Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments

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Monitoring endangered freshwater biodiversity using environmental DNA.

1 reference

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21 January 2018

The biogeography of mitochondrial and nuclear discordance in animals

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Mitochondrial genome content is regulated during nematode development

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Mitochondrial formation of reactive oxygen species

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Nuclear and mitochondrial DNA comparisons reveal extreme rate variation in the molecular clock

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Correlates of substitution rate variation in mammalian protein-coding sequences

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

The scaling and temperature dependence of vertebrate metabolism

1 reference

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21 January 2018

Quantifying the elevation of mitochondrial DNA evolutionary substitution rates over nuclear rates in the intertidal copepod Tigriopus californicus.

1 reference

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21 January 2018

PAML 4: phylogenetic analysis by maximum likelihood

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSX197

21 January 2018

Identifiers

10.1093/MOLBEV/MSX197

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/28981721

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

21 December 2017

http://europepmc.org/abstract/MED/28981721

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