(Q46589929)

23 December 2017

http://europepmc.org/abstract/MED/26915816

title

Transcriptome and metabolome of synthetic Solanum autotetraploids reveal key genomic stress events following polyploidization (English)

1 reference

23 December 2017

http://europepmc.org/abstract/MED/26915816

main subject

transcriptome

0 references

whole genome duplication

1 reference

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26915816%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Giovanni Giuliano

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26915816%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Carlo Fasano

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26915816%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Gianfranco Diretto

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26915816%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Nunzio D'Agostino

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26915816%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

author name string

Riccardo Aversano

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26915816%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Luigi Frusciante

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26915816%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

Domenico Carputo

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26915816%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

language of work or name

English

0 references

publication date

24 February 2016

1 reference

23 December 2017

http://europepmc.org/abstract/MED/26915816

published in

New Phytologist

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26915816%20AND%20SRC:MED&resulttype=core&format=json

31 May 2020

volume

210

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31 May 2020

issue

4

1 reference

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31 May 2020

page(s)

1382-1394

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26915816%20AND%20SRC:MED&resulttype=core&format=json

Hybridization, polyploidy and invasion: lessons from Spartina (Poaceae)

31 May 2020

cites work

1 reference

Large changes in anatomy and physiology between diploid Rangpur lime (Citrus limonia) and its autotetraploid are not associated with large changes in leaf gene expression.

21 January 2018

1 reference

The neurodegenerative-disease-related protein sacsin is a molecular chaperone.

21 January 2018

1 reference

Stochastic changes affect Solanum wild species following autopolyploidization

21 January 2018

1 reference

The Solanum commersonii Genome Sequence Provides Insights into Adaptation to Stress Conditions and Genome Evolution of Wild Potato Relatives

21 January 2018

1 reference

Molecular tools for exploring polyploid genomes in plants

21 January 2018

1 reference

Deciphering the complex leaf transcriptome of the allotetraploid species Nicotiana tabacum: a phylogenomic perspective

21 January 2018

1 reference

Secondary metabolite profile in induced tetraploids of wild Solanum commersonii Dun.

21 January 2018

1 reference

Genomic and epigenetic insights into the molecular bases of heterosis

21 January 2018

1 reference

Modulation of chlorogenic acid biosynthesis in Solanum lycopersicum; consequences for phenolic accumulation and UV-tolerance.

21 January 2018

1 reference

Morphological, cytological and metabolic consequences of autopolyploidization in Hylocereus (Cactaceae) species.

21 January 2018

1 reference

Contribution of subgenomes to the transcriptome and their intertwined regulation in the allopolyploid Coffea arabica grown at contrasted temperatures.

21 January 2018

1 reference

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

21 January 2018

1 reference

SolEST database: a "one-stop shop" approach to the study of Solanaceae transcriptomes

21 January 2018

1 reference

SDE3 encodes an RNA helicase required for post-transcriptional gene silencing in Arabidopsis

21 January 2018

1 reference

The ascorbic acid content of tomato fruits is associated with the expression of genes involved in pectin degradation

21 January 2018

1 reference

Transcriptional-metabolic networks in beta-carotene-enriched potato tubers: the long and winding road to the Golden phenotype

21 January 2018

1 reference

Plants with double genomes might have had a better chance to survive the Cretaceous-Tertiary extinction event

21 January 2018

1 reference

Structure of the high affinity complex of inositol trisphosphate with a phospholipase C pleckstrin homology domain

21 January 2018

1 reference

Respiratory metabolism: glycolysis, the TCA cycle and mitochondrial electron transport

21 January 2018

1 reference

Oligonucleotide/oligosaccharide-binding fold proteins: a growing family of genome guardians

21 January 2018

1 reference

Glutamate in plants: metabolism, regulation, and signalling.

21 January 2018

1 reference

Plant LysM proteins: modules mediating symbiosis and immunity

21 January 2018

1 reference

Use of mRNA-seq to discriminate contributions to the transcriptome from the constituent genomes of the polyploid crop species Brassica napus

21 January 2018

1 reference

Genomic and expression plasticity of polyploidy

21 January 2018

1 reference

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

21 January 2018

1 reference

Digital gene expression analysis of gene expression differences within Brassica diploids and allopolyploids

21 January 2018

1 reference

Ancestral polyploidy in seed plants and angiosperms

21 January 2018

1 reference

R2R3-NaMYB8 regulates the accumulation of phenylpropanoid-polyamine conjugates, which are essential for local and systemic defense against insect herbivores in Nicotiana attenuata.

21 January 2018

1 reference

Circos: an information aesthetic for comparative genomics

21 January 2018

1 reference

Alanine aminotransferase homologs catalyze the glutamate:glyoxylate aminotransferase reaction in peroxisomes of Arabidopsis.

21 January 2018

1 reference

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

21 January 2018

1 reference

Organic acid metabolism in plants: from adaptive physiology to transgenic varieties for cultivation in extreme soils

21 January 2018

1 reference

Ectopic expression of anthocyanin 5-o-glucosyltransferase in potato tuber causes increased resistance to bacteria.

21 January 2018

1 reference

Manduca sexta recognition and resistance among allopolyploid Nicotiana host plants

21 January 2018

1 reference

DNA precursor metabolism and genomic stability

21 January 2018

1 reference

Tobacco O-methyltransferases involved in phenylpropanoid metabolism. The different caffeoyl-coenzyme A/5-hydroxyferuloyl-coenzyme A 3/5-O-methyltransferase and caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase classes have distinct substrat

21 January 2018

1 reference

Articulation of three core metabolic processes in Arabidopsis: fatty acid biosynthesis, leucine catabolism and starch metabolism

21 January 2018

1 reference

A Revised Medium for Rapid Growth and Bio Assays with Tobacco Tissue Cultures

21 January 2018

1 reference

Engineering plants with increased levels of the antioxidant chlorogenic acid

21 January 2018

1 reference

Evolutionary consequences of autopolyploidy

21 January 2018

1 reference

Innovation in anti-herbivore defense systems during neopolypoloidy - the functional consequences of instantaneous speciation

21 January 2018

1 reference

Differential sensitivity of the Arabidopsis thaliana transcriptome and enhancers to the effects of genome doubling

21 January 2018

1 reference

Genome sequence and analysis of the tuber crop potato

21 January 2018

1 reference

Deciphering the molecular bases for drought tolerance in Arabidopsis autotetraploids

21 January 2018

1 reference

Chlorophyll breakdown: pheophorbide a oxygenase is a Rieske-type iron-sulfur protein, encoded by the accelerated cell death 1 gene

21 January 2018

1 reference

InterProScan: protein domains identifier

21 January 2018

1 reference

Polyploidy and the petal transcriptome of Gossypium

21 January 2018

1 reference

GoMapMan: integration, consolidation and visualization of plant gene annotations within the MapMan ontology

21 January 2018

1 reference

Neopolyploidy in Flowering Plants

21 January 2018

1 reference

Down-regulation of cinnamoyl-CoA reductase in tomato (Solanum lycopersicum L.) induces dramatic changes in soluble phenolic pools.

21 January 2018

1 reference

Expression of the patatin-related phospholipase A gene AtPLA IIA in Arabidopsis thaliana is up-regulated by salicylic acid, wounding, ethylene, and iron and phosphate deficiency

21 January 2018

1 reference

OligoArray 2.0: design of oligonucleotide probes for DNA microarrays using a thermodynamic approach

21 January 2018

1 reference

Phospholipase D and phosphatidic acid-mediated generation of superoxide in Arabidopsis

21 January 2018

1 reference

Novel aspects of glutamine synthetase (GS) regulation revealed by a detailed expression analysis of the entire GS gene family of Medicago truncatula under different physiological conditions

21 January 2018

1 reference

Construction of reference chromosome-scale pseudomolecules for potato: integrating the potato genome with genetic and physical maps

21 January 2018

1 reference

Phenotypic and transcriptomic changes associated with potato autopolyploidization

21 January 2018

1 reference

Comparative metabolic and transcriptional analysis of a doubled diploid and its diploid citrus rootstock (C. junos cv. Ziyang xiangcheng) suggests its potential value for stress resistance improvement

21 January 2018

1 reference

Natural pathways to polyploidy in plants and consequences for genome reorganization

21 January 2018

1 reference

MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes

21 January 2018

1 reference

The tomato genome sequence provides insights into fleshy fruit evolution

21 January 2018

1 reference

Genome Microscale Heterogeneity among Wild Potatoes Revealed by Diversity Arrays Technology Marker Sequences

21 January 2018

1 reference

Physiological concentrations of purines and pyrimidines

21 January 2018

1 reference

Genomewide nonadditive gene regulation in Arabidopsis allotetraploids

21 January 2018

1 reference

The frequency of polyploid speciation in vascular plants

21 January 2018

1 reference

Induction and flow cytometry identification of tetraploids from seed-derived explants through colchicine treatments in Catharanthus roseus (L.) G. Don

21 January 2018

1 reference

Partial deficiency of isoleucine impairs root development and alters transcript levels of the genes involved in branched-chain amino acid and glucosinolate metabolism in Arabidopsis

21 January 2018

1 reference

Impact of natural genetic variation on the transcriptome of autotetraploid Arabidopsis thaliana

21 January 2018

1 reference

Differential transcriptome analysis between Paulownia fortunei and its synthesized autopolyploid

21 January 2018

1 reference

PYRIMIDINE AND PURINE BIOSYNTHESIS AND DEGRADATION IN PLANTS

21 January 2018

1 reference