(Q46655452)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20888970%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

title

Software tools for molecular microscopy: an open-text Wikibook (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20888970%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20888970%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Bridget Carragher

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20888970%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Phillip R Smith

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20888970%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

author name string

Clinton S Potter

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20888970%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

language of work or name

English

0 references

publication date

1 January 2010

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20888970%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

published in

Methods in Enzymology

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20888970%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

volume

482

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20888970%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

page(s)

381-392

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20888970%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Markov random field based automatic image alignment for electron tomography

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Angle determination for side views in single particle electron microscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Identification of secondary structure elements in intermediate-resolution density maps

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Automated monitoring to reduce electron microscope downtime

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Analytical methods and software tools for macromolecular microscopy.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Helical processing using PHOELIX.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Software tools for macromolecular microscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

SIGNATURE: a single-particle selection system for molecular electron microscopy.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

MRC image processing programs

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

The iterative helical real space reconstruction method: surmounting the problems posed by real polymers

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

TOMOBFLOW: feature-preserving noise filtering for electron tomography

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

An improved algorithm for anisotropic nonlinear diffusion for denoising cryo-tomograms

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

CTF determination and correction in electron cryotomography.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Sharpening high resolution information in single particle electron cryomicroscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Three-dimensional reconstruction of icosahedral particles--the uncommon line

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

2dx--user-friendly image processing for 2D crystals

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Visualizing density maps with UCSF Chimera

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

FREALIGN: high-resolution refinement of single particle structures

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Bsoft: image processing and molecular modeling for electron microscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

SPARX, a new environment for Cryo-EM image processing

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Computer visualization of three-dimensional image data using IMOD

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Appion: an integrated, database-driven pipeline to facilitate EM image processing

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Transform-based backprojection for volume reconstruction of large format electron microscope tilt series

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

EMAN: semiautomated software for high-resolution single-particle reconstructions

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

ACE: automated CTF estimation

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Automated electron microscope tomography using robust prediction of specimen movements

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

TomoJ: tomography software for three-dimensional reconstruction in transmission electron microscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Ruby-Helix: an implementation of helical image processing based on object-oriented scripting language.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Accurate determination of local defocus and specimen tilt in electron microscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

TOM software toolbox: acquisition and analysis for electron tomography.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Image analysis of helical objects: the Brandeis Helical Package

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Collaborative EM image processing with the IPLT image processing library and toolbox

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Cyclops: new modular software suite for cryo-EM.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

A visualization and segmentation toolbox for electron microscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Automatic acquisition of fiducial markers and alignment of images in tilt series for electron tomography.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

FindEM--a fast, efficient program for automatic selection of particles from electron micrographs

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Combining Electron Microscopic with X-Ray Crystallographic Structures

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

SUPRIM: easily modified image processing software.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

UROX 2.0: an interactive tool for fitting atomic models into electron-microscopy reconstructions

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Software tools for molecular microscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

The micrograph data processing program.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

XMIPP: a new generation of an open-source image processing package for electron microscopy.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Ab initio resolution measurement for single particle structures

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

NORMA: a tool for flexible fitting of high-resolution protein structures into low-resolution electron-microscopy-derived density maps.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Automated molecular microscopy: the new Leginon system

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

New electron microscopy database and deposition system

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

EMAN2: an extensible image processing suite for electron microscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Efficient automatic noise reduction of electron tomographic reconstructions based on iterative median filtering.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Fourier shell correlation threshold criteria

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

A new generation of the IMAGIC image processing system

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

A novel three-dimensional variant of the watershed transform for segmentation of electron density maps

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Quantitative fitting of atomic models into observed densities derived by electron microscopy.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

DoG Picker and TiltPicker: software tools to facilitate particle selection in single particle electron microscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Accurate marker-free alignment with simultaneous geometry determination and reconstruction of tilt series in electron tomography

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

SwarmPS: rapid, semi-automated single particle selection software

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Situs: A package for docking crystal structures into low-resolution maps from electron microscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Interpretation of electron density with stereographic roadmap projections

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

AUTO3DEM--an automated and high throughput program for image reconstruction of icosahedral particles

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

Extensible and object-oriented system Eos supplies a new environment for image analysis of electron micrographs of macromolecules

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021

UCSF tomography: an integrated software suite for real-time electron microscopic tomographic data collection, alignment, and reconstruction

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2810%2982016-6

7 January 2021