(Q47248039)

18 June 2018

title

Dynamics of Escherichia coli type I-E CRISPR spacers over 42 000 years (English)

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18 June 2018

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Ekaterina Savitskaya

1

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18 June 2018

Anna Lopatina

2

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18 June 2018

Sofia Medvedeva

3

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18 June 2018

Mikhail Kapustin

4

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18 June 2018

Sergey Shmakov

5

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18 June 2018

Alexey Tikhonov

6

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18 June 2018

Irena I Artamonova

7

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18 June 2018

Maria Logacheva

8

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18 June 2018

Konstantin Severinov

9

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18 June 2018

publication date

17 January 2017

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18 June 2018

published in

Molecular Ecology

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18 June 2018

volume

26

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18 June 2018

issue

7

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18 June 2018

page(s)

2019-2026

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18 June 2018

Metagenomic Analysis of Bacterial Communities of Antarctic Surface Snow

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An updated evolutionary classification of CRISPR-Cas systems

22 June 2018

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Metagenomic reconstructions of bacterial CRISPR loci constrain population histories.

22 June 2018

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The Contribution of Genetic Recombination to CRISPR Array Evolution.

22 June 2018

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CRISPR Diversity in E. coli Isolates from Australian Animals, Humans and Environmental Waters

22 June 2018

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CRISPR immunity drives rapid phage genome evolution in Streptococcus thermophilus

22 June 2018

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The future of ancient DNA: Technical advances and conceptual shifts

22 June 2018

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Pervasive generation of oppositely oriented spacers during CRISPR adaptation

22 June 2018

1 reference

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22 June 2018

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Selective and hyperactive uptake of foreign DNA by adaptive immune systems of an archaeon via two distinct mechanisms.

22 June 2018

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Molecular memory of prior infections activates the CRISPR/Cas adaptive bacterial immunity system

22 June 2018

1 reference

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CRISPR interference directs strand specific spacer acquisition

22 June 2018

1 reference

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Proteins and DNA elements essential for the CRISPR adaptation process in Escherichia coli

22 June 2018

1 reference

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CRISPR distribution within the Escherichia coli species is not suggestive of immunity-associated diversifying selection.

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5851898

Transcription, processing and function of CRISPR cassettes in Escherichia coli

22 June 2018

1 reference

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The small, slow and specialized CRISPR and anti-CRISPR of Escherichia and Salmonella

22 June 2018

1 reference

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Diversity of CRISPR loci in Escherichia coli

22 June 2018

1 reference

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Identification and characterization of E. coli CRISPR-cas promoters and their silencing by H-NS.

22 June 2018

1 reference

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22 June 2018

1 reference

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CRISPR-based adaptive and heritable immunity in prokaryotes

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5851898

CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNA

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5851898

Small CRISPR RNAs guide antiviral defense in prokaryotes

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5851898

Virus population dynamics and acquired virus resistance in natural microbial communities

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5851898

Phage response to CRISPR-encoded resistance in Streptococcus thermophilus

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5851898

Diversity, activity, and evolution of CRISPR loci in Streptococcus thermophilus

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5851898

CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5851898

Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal origin

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5851898

Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5851898

CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies.

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5851898

WebLogo: A Sequence Logo Generator

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5851898

Molecular coproscopy: dung and diet of the extinct ground sloth Nothrotheriops shastensis

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5851898

Strong bias in the bacterial CRISPR elements that confer immunity to phage.

22 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5851898

The highly dynamic CRISPR1 system of Streptococcus agalactiae controls the diversity of its mobilome.

14 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5851898

14 August 2018

Identifiers

DOI

10.1111/MEC.13961

1 reference

18 June 2018

PMC publication ID

5851898

1 reference

18 June 2018

PubMed publication ID

27997045

1 reference

18 June 2018