(Q47418783)

16 January 2018

title

Regulatory divergence of the duplicated chromosomal loci sox11a/b by subpartitioning and sequence evolution of enhancers in zebrafish (English)

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16 January 2018

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2

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16 January 2018

Boris Lenhard

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3

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16 January 2018

author name string

Pavla Navratilova

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1

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16 January 2018

Thomas S Becker

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4

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16 January 2018

publication date

29 December 2009

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16 January 2018

Molecular Genetics and Genomics

published in

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16 January 2018

volume

283

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16 January 2018

issue

2

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16 January 2018

page(s)

171-184

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16 January 2018

https://scigraph.springernature.com/pub.10.1007/s00438-009-0503-1

exact match

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cites work

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Id proteins Id1 and Id2 selectively inhibit DNA binding by one class of helix-loop-helix proteins

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Preservation of duplicate genes by complementary, degenerative mutations

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The zebrafish gene map defines ancestral vertebrate chromosomes

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Phylogenetic timing of the fish-specific genome duplication correlates with the diversification of teleost fish

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The establishment of neuronal properties is controlled by Sox4 and Sox11

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Human-mouse alignments with BLASTZ

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Systematic human/zebrafish comparative identification of cis-regulatory activity around vertebrate developmental transcription factor genes.

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Gene targeting reveals a widespread role for the high-mobility-group transcription factor Sox11 in tissue remodeling

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In vivo enhancer analysis of human conserved non-coding sequences

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SRY-box containing gene 11 (Sox11) transcription factor is required for neuron survival and neurite growth.

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Evaluating the biological relevance of putative enhancers using Tol2 transposon-mediated transgenesis in zebrafish

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Enhancer detection in the zebrafish using pseudotyped murine retroviruses

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Transposon-mediated gene trapping in zebrafish.

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Genome duplication, a trait shared by 22000 species of ray-finned fish

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The random versus fragile breakage models of chromosome evolution: a matter of resolution

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Anterior segment dysgenesis in the eyes of mice deficient for the high-mobility-group transcription factor Sox11

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Comparable rates of gene loss and functional divergence after genome duplications early in vertebrate evolution

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Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype

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Combinatorial binding predicts spatio-temporal cis-regulatory activity

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The ghost of selection past: rates of evolution and functional divergence of anciently duplicated genes.

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Genomic regulatory blocks encompass multiple neighboring genes and maintain conserved synteny in vertebrates

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A functional survey of the enhancer activity of conserved non-coding sequences from vertebrate Iroquois cluster gene deserts.

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Highly conserved non-coding sequences are associated with vertebrate development

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Cooperation of sonic hedgehog enhancers in midline expression.

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Large-scale enhancer detection in the zebrafish genome

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Comparative genomics using Fugu reveals insights into regulatory subfunctionalization

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Splitting pairs: the diverging fates of duplicated genes

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12 December 2020

How often do duplicated genes evolve new functions?

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Segregation of telencephalic and eye-field identities inside the zebrafish forebrain territory is controlled by Rx3.

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Retroviral enhancer detection insertions in zebrafish combined with comparative genomics reveal genomic regulatory blocks - a fundamental feature of vertebrate genomes

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The words of the regulatory code are arranged in a variable manner in highly conserved enhancers.

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Subfunctionalization of duplicated zebrafish pax6 genes by cis-regulatory divergence

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Promoter analysis in living zebrafish embryos identifies a cis-acting motif required for neuronal expression of GATA-2.

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12 December 2020

Functional diversification of sonic hedgehog paralog enhancers identified by phylogenomic reconstruction

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Evolutionary origins and maintenance of redundant gene expression during metazoan development

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Cloning of the zebrafish krox-20 gene (krx-20) and its expression during hindbrain development

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12 December 2020

Genomic regulatory blocks underlie extensive microsynteny conservation in insects

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12 December 2020

Arrays of ultraconserved non-coding regions span the loci of key developmental genes in vertebrate genomes

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12 December 2020

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12 December 2020

Ancient linkage groups and frozen accidents

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12 December 2020

Ultraconserved Elements in the Human Genome

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12 December 2020

Expression of sox11 gene duplicates in zebrafish suggests the reciprocal loss of ancestral gene expression patterns in development

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12 December 2020

The limits of subfunctionalization

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12 December 2020

Gen(om)e duplications in the evolution of early vertebrates

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12 December 2020

10.1007/S00438-009-0503-1

Identifiers

DOI

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16 January 2018

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16 January 2018