(Q47560895)

3 February 2018

title

Kaposi's sarcoma: a computational approach through protein-protein interaction and gene regulatory networks analysis (English)

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3 February 2018

main subject

computational biology

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protein-protein interaction

inferred from title

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1 reference

Aubhishek Zaman

1

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3 February 2018

Md Habibur Rahaman

series ordinal

2

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3 February 2018

Samsad Razzaque

series ordinal

3

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3 February 2018

publication date

25 December 2012

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3 February 2018

published in

Virus Genes

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3 February 2018

volume

46

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3 February 2018

issue

2

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3 February 2018

page(s)

242-254

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3 February 2018

https://scigraph.springernature.com/pub.10.1007/s11262-012-0865-z

exact match

0 references

cites work

Viruses in the pathogenesis of Kaposi's sarcoma--a review

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Classic Kaposi's sarcoma: a review of 90 cases

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Kaposi's sarcoma: a review of the classical and epidemic forms

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Kaposi's sarcoma-associated herpesvirus-induced angiogenin plays roles in latency via the phospholipase C gamma pathway: blocking angiogenin inhibits latent gene expression and induces the lytic cycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Identification and functional characterization of a spliced rhesus rhadinovirus gene with homology to the K15 gene of Kaposi's sarcoma-associated herpesvirus

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

KSHV PAN RNA associates with demethylases UTX and JMJD3 to activate lytic replication through a physical interaction with the virus genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

An interaction between KSHV ORF57 and UIF provides mRNA-adaptor redundancy in herpesvirus intronless mRNA export.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

The interaction between KSHV RTA and cellular RBP-Jkappa and their subsequent DNA binding are not sufficient for activation of RBP-Jkappa

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

The lytic switch protein of KSHV activates gene expression via functional interaction with RBP-Jkappa (CSL), the target of the Notch signaling pathway.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Kaposi's sarcoma-associated herpesvirus ORF54/dUTPase downregulates a ligand for the NK activating receptor NKp44.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Roles of uracil-DNA glycosylase and dUTPase in virus replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Expression of viral and human dUTPase in Epstein-Barr virus-associated diseases

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Molecular interaction maps of bioregulatory networks: a general rubric for systems biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Interaction networks for systems biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Systems biology of virus entry in mammalian cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Systems biology of virus infection in mammalian cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Virus-host interactions: from systems biology to translational research

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

A systems biology approach to construct the gene regulatory network of systemic inflammation via microarray and databases mining

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Adenoviruses—: Model Systems of Virus Replication, Human Cell Molecular Biology, and Neoplastic Transformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Systems biology of virus-host signaling network interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Proteomic analysis of the Kaposi's sarcoma-associated herpesvirus terminal repeat element binding proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Development of human protein reference database as an initial platform for approaching systems biology in humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

A first-draft human protein-interaction map

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Identification of potential interaction networks using sequence-based searches for conserved protein-protein interactions or "interologs".

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Kaposi's sarcoma-associated herpesvirus reactivation is regulated by interaction of latency-associated nuclear antigen with recombination signal sequence-binding protein Jkappa, the major downstream effector of the Notch signaling pathway

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Interaction of c-Cbl with myosin IIA regulates Bleb associated macropinocytosis of Kaposi's sarcoma-associated herpesvirus

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Interaction of herpes simplex virus type 2 (HSV-2) glycoprotein D with the host cell surface is sufficient to induce Chlamydia trachomatis persistence

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

BIND: the Biomolecular Interaction Network Database

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Polypeptide modulators of caspase recruitment domain (CARD)-CARD-mediated protein-protein interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

The CARD domain: a new apoptotic signalling motif

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Vanillin inhibits matrix metalloproteinase-9 expression through down-regulation of nuclear factor-kappaB signaling pathway in human hepatocellular carcinoma cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

MMPs are less efficient than ADAMTS5 in cleaving aggrecan core protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Kaposi's sarcoma in rheumatoid arthritis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

ADAMTS5 is the major aggrecanase in mouse cartilage in vivo and in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Adamts5, the gene encoding a proteoglycan-degrading metalloprotease, is expressed by specific cell lineages during mouse embryonic development and in adult tissues.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

'Holy' proteins. II: The soluble lytic transglycosylase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Lack of association of RAD51 genetic variations with hepatitis B virus clearance and occurrence of hepatocellular carcinoma in a Korean population

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

PCNA interacts with Indian mung bean yellow mosaic virus rep and downregulates Rep activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Mycosis fungoides: expression of C-myc p62 p53, bcl-2 and PCNA proteins and absence of association with Epstein-Barr virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Proliferating cell nuclear antigen (PCNA) in herpes virus infected cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Analysis of an ankyrin-like region in Epstein Barr Virus encoded (EBV) BZLF-1 (ZEBRA) protein: implications for interactions with NF-κB and p53.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Induction of Epstein-Barr virus lytic replication by recombinant adenoviruses expressing the zebra gene with EBV specific promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

High Epstein-Barr virus serum load and elevated titers of anti-ZEBRA antibodies in patients with EBV-harboring tumor cells of Hodgkin's disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Epstein-Barr virus (EBV) Rta-mediated EBV and Kaposi's sarcoma-associated herpesvirus lytic reactivations in 293 cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Werner helicase-interacting protein 1 binds polyubiquitin via its zinc finger domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Human Werner helicase interacting protein 1 (WRNIP1) functions as a novel modulator for DNA polymerase delta

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

N-cadherin expression is correlated with metastasis of spindle cell carcinoma of head and neck region.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Tight junction proteins claudin-3 and claudin-4 control tumor growth and metastases

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Absence of glutathione peroxidase 4 affects tumor angiogenesis through increased 12/15-lipoxygenase activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Highly selective escape from KSHV-mediated host mRNA shutoff and its implications for viral pathogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Lytic KSHV infection inhibits host gene expression by accelerating global mRNA turnover

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Role of the chemokines CCL3/MIP-1 alpha and CCL5/RANTES in sponge-induced inflammatory angiogenesis in mice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Identification and characterization of a novel human testis-specific kinase substrate gene which is downregulated in testicular tumors

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Rab5c promotes AMAP1-PRKD2 complex formation to enhance β1 integrin recycling in EGF-induced cancer invasion

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Overexpression of c-maf is a frequent oncogenic event in multiple myeloma that promotes proliferation and pathological interactions with bone marrow stroma

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Tumor suppressor gene identification using retroviral insertional mutagenesis in Blm-deficient mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

The KSHV viral IL-6 homolog is sufficient to induce blood to lymphatic endothelial cell differentiation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

The Kaposi's sarcoma-related herpesvirus (KSHV)-encoded chemokine vMIP-I is a specific agonist for the CC chemokine receptor (CCR)8

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

KSHV vFLIP is essential for the survival of infected lymphoma cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Constitutively active K-cyclin/cdk6 kinase in Kaposi sarcoma-associated herpesvirus-infected cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Reversible diabetes in patient with AIDS-related Kaposi's sarcoma treated with interferon α-2a

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11262-012-0865-Z

Herpes Simplex Virus and the Human Nervous System: Current Concepts and Review

21 January 2018

1 reference

12 December 2020

A review of Kaposi's sarcoma.

1 reference

12 December 2020

Plaque oxysterols induce unbalanced up-regulation of matrix metalloproteinase-9 in macrophagic cells through redox-sensitive signaling pathways: Implications regarding the vulnerability of atherosclerotic lesions

1 reference

12 December 2020

Kaposi's sarcoma and diabetes mellitus

1 reference

12 December 2020

Characterization and cell cycle regulation of the major Kaposi's sarcoma-associated herpesvirus (human herpesvirus 8) latent genes and their promoter

1 reference

12 December 2020

Systems biology and its impact on anti-infective drug development

1 reference

12 December 2020

Human Herpes Virus 8 and Kaposi's Sarcoma: A Review

1 reference

12 December 2020

Clathrin heavy chain is required for TNF-induced inflammatory signaling

1 reference

12 December 2020

A putative lytic transglycosylase tightly regulated and critical for the EHEC type three secretion

1 reference

12 December 2020

Expression of E-cadherin and vimentin correlates with metastasis formation in head and neck squamous cell carcinoma patients

1 reference

12 December 2020

Kaposi's sarcoma, chronic ulcerative herpes simplex, and acquired immunodeficiency

1 reference

12 December 2020

Transcription factor decoy approach to decipher the role of NF-kappa B in oncogenesis

1 reference

12 December 2020

Herpes virus infections of non-human primates: a review

1 reference

12 December 2020

Expression of Anti-PCNA mRNA Ribozyme by T7 Vaccinia Virus System in HeLa Cells

1 reference

12 December 2020

The lytic activation of KSHV during keratinocyte differentiation is dependent upon a suprabasal position, the loss of integrin engagement, and calcium, but not the interaction of cadherins

1 reference

12 December 2020

Reduction-oxidation (redox) state regulation of matrix metalloproteinase activity in human fetal membranes

1 reference

12 December 2020

A case of Kaposi's disease associated with chronic lymphatic leukemia

1 reference

12 December 2020

Systems biology-based identification of crosstalk between E2F transcription factors and the Fanconi anemia pathway.

1 reference

12 December 2020

Molecular systems biology in drug development

1 reference

12 December 2020

Immediate-early transactivator Rta of Epstein-Barr virus (EBV) shows multiple epitopes recognized by EBV-specific cytotoxic T lymphocytes

1 reference

12 December 2020

LYDMA-antigens and immunity against EBV-infected cells Epstein-Barr virus as a model for the study of host-infection interaction

1 reference

12 December 2020

Interaction of cytomegalovirus immune complexes with host cells

1 reference

12 December 2020

Kaposi's sarcoma associated with human immunodeficiency virus infection: a clinical, histological, immunohistochemical, serological and development review

1 reference

12 December 2020

1 reference

12 December 2020

Inactivation of NF-kappaB by EBV BZLF-1-encoded ZEBRA protein in human T cells

1 reference

12 December 2020

Kaposi's sarcoma of the head and neck: a review

1 reference

12 December 2020

Identification of a spliced gene from Kaposi's sarcoma-associated herpesvirus encoding a protein with similarities to latent membrane proteins 1 and 2A of Epstein-Barr virus

1 reference

12 December 2020

Association of common polymorphisms in inflammatory genes interleukin (IL)6, IL8, tumor necrosis factor alpha, NFKB1, and peroxisome proliferator-activated receptor gamma with colorectal cancer

1 reference

12 December 2020

Kaposi's sarcoma associated with acute leukemia

1 reference

12 December 2020

Kaposi's sarcoma, rheumatoid arthritis and immunosuppressive and/or corticosteroid therapy

1 reference

12 December 2020

Non-HIV Kaposi's sarcoma: a review and therapeutic perspectives

1 reference

12 December 2020

The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored

1 reference

12 December 2020

Systems biology: new paradigms for cell biology and drug design.

1 reference

12 December 2020

10.1007/S11262-012-0865-Z

Identifiers

DOI

1 reference

3 February 2018

PubMed ID

23266878

1 reference

3 February 2018