(Q47569905)

4 February 2018

title

Prediction and analysis of cell-penetrating peptides using pseudo-amino acid composition and random forest models (English)

1 reference

4 February 2018

1 reference

1

1 reference

4 February 2018

Yudong Cai

5

1 reference

4 February 2018

author name string

Chen Chu

2

1 reference

4 February 2018

Tao Huang

3

1 reference

4 February 2018

Xiangyin Kong

4

1 reference

4 February 2018

publication date

18 April 2015

1 reference

4 February 2018

published in

Amino Acids

1 reference

4 February 2018

volume

47

1 reference

4 February 2018

issue

7

1 reference

4 February 2018

page(s)

1485-1493

1 reference

4 February 2018

https://scigraph.springernature.com/pub.10.1007/s00726-015-1974-5

exact match

0 references

cites work

siRNA versus pharmacological inhibition of endocytic pathways for studying cellular uptake of cell penetrating peptides

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Solving the protein sequence metric problem

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Assessing the accuracy of prediction algorithms for classification: an overview

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Recent developments and future directions at Current Computer Aided Drug Design

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Identifying Important Risk Factors for Survival in Kidney Graft Failure Patients Using Random Survival Forests

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Prediction of protein secondary structure content by using the concept of Chou's pseudo amino acid composition and support vector machine

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Predicting the network of substrate-enzyme-product triads by combining compound similarity and functional domain composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Predicting Anatomical Therapeutic Chemical (ATC) classification of drugs by integrating chemical-chemical interactions and similarities

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Prediction of Metabolic Pathway Using Graph Property, Chemical Functional Group and Chemical Structural Set

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Finding candidate drugs for hepatitis C based on chemical-chemical and chemical-protein interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Prediction of protein cellular attributes using pseudo-amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Identify Golgi protein types with modified Mahalanobis discriminant algorithm and pseudo amino acid composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Prediction of secondary structural content of proteins from their amino acid composition alone. I. New analytic vector decomposition methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Cell-penetrating peptides: mechanisms and applications

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

An unusual cell penetrating peptide identified using a plasmid display-based functional selection platform

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

In silico approaches for designing highly effective cell penetrating peptides.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Predicting anticancer peptides with Chou's pseudo amino acid composition and investigating their mutagenicity via Ames test

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

An ensemble method for predicting subnuclear localizations from primary protein structures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Predicting cell-penetrating peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Predicting membrane protein types by fusing composite protein sequence features into pseudo amino acid composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Twenty years of cell-penetrating peptides: from molecular mechanisms to therapeutics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Predicting gene expression level from codon usage bias.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Analysis and prediction of the metabolic stability of proteins based on their sequential features, subcellular locations and interaction networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Classification and analysis of regulatory pathways using graph property, biochemical and physicochemical property, and functional property

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Prediction of multi-type membrane proteins in human by an integrated approach.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Cell-penetrating peptides—A brief introduction

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

AFP-Pred: A random forest approach for predicting antifreeze proteins from sequence-derived properties.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Accurate prediction of protein structural classes by incorporating predicted secondary structure information into the general form of Chou's pseudo amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Screening of cell-penetrating peptides using mRNA display

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Prediction of protein-protein interaction sites by random forest algorithm with mRMR and IFS

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Prediction of protein domain with mRMR feature selection and analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Prediction of aptamer-target interacting pairs with pseudo-amino acid composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

The modified Mahalanobis Discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

iDNA-Prot: identification of DNA binding proteins using random forest with grey model

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

PepFect15, a novel endosomolytic cell-penetrating peptide for oligonucleotide delivery via scavenger receptors

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Mechanisms of cellular uptake of cell-penetrating peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

A reexamination of correlations of amino acids with particular secondary structures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Protein structure prediction from sequence variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Prediction of GABAA receptor proteins using the concept of Chou's pseudo-amino acid composition and support vector machine

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Xentry, a new class of cell-penetrating peptide uniquely equipped for delivery of drugs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Comparison of cellular uptake using 22 CPPs in 4 different cell lines.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Influence of protein transduction domains on intracellular delivery of macromolecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Identifying bacterial virulent proteins by fusing a set of classifiers based on variants of Chou's pseudo amino acid composition and on evolutionary information

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Computational drug discovery

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Feature selection based on mutual information: criteria of max-dependency, max-relevance, and min-redundancy

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

RSARF: prediction of residue solvent accessibility from protein sequence using random forest method

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Cellular uptake of unconjugated TAT peptide involves clathrin-dependent endocytosis and heparan sulfate receptors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Predicting gene expression level from relative codon usage bias: an application to Escherichia coli genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

A machine-learning approach for predicting B-cell epitopes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Prediction of cell penetrating peptides by support vector machines

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

A computational pipeline for protein structure prediction and analysis at genome scale.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

3dswap-pred: prediction of 3D domain swapping from protein sequence using Random Forest approach.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

nDNA-Prot: identification of DNA-binding proteins based on unbalanced classification.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Roles of arginine and lysine residues in the translocation of a cell-penetrating peptide from (13)C, (31)P, and (19)F solid-state NMR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Computational phosphorylation site prediction in plants using random forests and organism-specific instance weights

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Prediction of antimicrobial peptides based on sequence alignment and feature selection methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Identification of thyroid carcinoma related genes with mRMR and shortest path approaches

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Determination of penetratin secondary structure in live cells with Raman microscopy

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Gene selection algorithm by combining reliefF and mRMR

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Predicting protease types by hybridizing gene ontology and pseudo amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

Supersecondary structure prediction using Chou's pseudo amino acid composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00726-015-1974-5

10.1007/S00726-015-1974-5

21 January 2018

Identifiers

DOI

1 reference

4 February 2018

1 reference

4 February 2018