(Q47579578)

4 February 2018

title

Steered molecular dynamics simulations on the binding of the appendant structure and helix-β2 in domain-swapped human cystatin C dimer (English)

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4 February 2018

author

Gary W Jones

6

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4 February 2018

author name string

Manli Shen

1

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4 February 2018

Jing Guan

2

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4 February 2018

Linan Xu

3

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4 February 2018

Yuanyuan Yu

4

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4 February 2018

Jianwei He

5

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4 February 2018

Youtao Song

7

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4 February 2018

publication date

26 June 2012

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4 February 2018

Journal of Biomolecular Structure and Dynamics

published in

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4 February 2018

volume

30

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4 February 2018

issue

6

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4 February 2018

page(s)

652-661

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4 February 2018

Flexible protein-protein docking

cites work

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

Distinct properties of wild-type and the amyloidogenic human cystatin C variant of hereditary cerebral hemorrhage with amyloidosis, Icelandic type

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

Ligand binding: molecular mechanics calculation of the streptavidin-biotin rupture force

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

VMD: visual molecular dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

Steered molecular dynamics and mechanical functions of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

Human cystatin C, an amyloidogenic protein, dimerizes through three-dimensional domain swapping

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

Crystal structure of the human prion protein reveals a mechanism for oligomerization

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

Prevention of domain swapping inhibits dimerization and amyloid fibril formation of cystatin C: use of engineered disulfide bridges, antibodies, and carboxymethylpapain to stabilize the monomeric form of cystatin C.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

Hinge-loop mutation can be used to control 3D domain swapping and amyloidogenesis of human cystatin C

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

MP2 energy evaluation by direct methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

Three-dimensional domain swapping in p13suc1 occurs in the unfolded state and is controlled by conserved proline residues.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

Cystatin forms a tetramer through structural rearrangement of domain-swapped dimers prior to amyloidogenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

Three-dimensional domain swapping in the folded and molten-globule states of cystatins, an amyloid-forming structural superfamily

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

A molecular dynamics simulation of the human lysozyme - camelid VHH HL6 antibody system

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

Dynamic properties of extremophilic subtilisin-like serine-proteases

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

Fibrillogenic oligomers of human cystatin C are formed by propagated domain swapping

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

Protein oligomerization through domain swapping: role of inter-molecular interactions and protein concentration

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

Structural and dynamic properties of a new amyloidogenic chicken cystatin mutant I108T.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

Crystal structure of interleukin-10 reveals the functional dimer with an unexpected topological similarity to interferon gamma

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

Mechanism of CDK5 activation revealed by steered molecular dynamics simulations and energy calculations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

3D domain-swapped human cystatin C with amyloidlike intermolecular β-sheets

21 January 2018

1 reference

https://api.crossref.org/works/10.1080%2F07391102.2012.689698

10.1080/07391102.2012.689698

21 January 2018

Identifiers

DOI

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4 February 2018

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4 February 2018