(Q47580798)

4 February 2018

title

RESQUE: network reduction using semi-Markov random walk scores for efficient querying of biological networks (English)

1 reference

4 February 2018

author name string

Sayed Mohammad Ebrahim Sahraeian

series ordinal

1

1 reference

4 February 2018

Byung-Jun Yoon

series ordinal

2

1 reference

4 February 2018

language of work or name

English

0 references

publication date

23 June 2012

1 reference

4 February 2018

published in

Bioinformatics

1 reference

4 February 2018

volume

28

1 reference

4 February 2018

issue

16

1 reference

4 February 2018

page(s)

2129-2136

1 reference

4 February 2018

Gene ontology: tool for the unification of biology

cites work

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

SubMAP: aligning metabolic pathways with subnetwork mappings

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

Network biology: understanding the cell's functional organization

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

Querying graphs in protein-protein interactions networks using feedback vertex set.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

GO::TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

Topology-free querying of protein interaction networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

Interactome: gateway into systems biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

QNet: a tool for querying protein interaction networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

ProbCons: Probabilistic consistency-based multiple sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

GenoLink: a graph-based querying and browsing system for investigating the function of genes and proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

NetMatch: a Cytoscape plugin for searching biological networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

Asymmetric comparison and querying of biological networks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

Biological network querying techniques: analysis and comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

UPA, a universal protein array system for quantitative detection of protein-protein, protein-DNA, protein-RNA and protein-ligand interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

RINQ: Reference-based Indexing for Network Queries

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

Mining physical protein-protein interactions from the literature

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

KEGG: kyoto encyclopedia of genes and genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

PathBLAST: a tool for alignment of protein interaction networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

Human Protein Reference Database--2009 update

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

The Hungarian method for the assignment problem

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

IsoRankN: spectral methods for global alignment of multiple protein networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

SIGMA: a set-cover-based inexact graph matching algorithm.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

IsoBase: a database of functionally related proteins across PPI networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

Alignment of metabolic pathways.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

Querying pathways in protein interaction networks based on hidden Markov models

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

PicXAA: greedy probabilistic construction of maximum expected accuracy alignment of multiple sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

The Database of Interacting Proteins: 2004 update

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

Modeling cellular machinery through biological network comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

QPath: a method for querying pathways in a protein-protein interaction network

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

Global alignment of multiple protein interaction networks with application to functional orthology detection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

The BioGRID Interaction Database: 2011 update

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

SAGA: a subgraph matching tool for biological graphs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

Simple and fast alignment of metabolic pathways by exploiting local diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

Path matching and graph matching in biological networks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTS341

10.1093/BIOINFORMATICS/BTS341

21 January 2018

Identifiers

DOI

1 reference

4 February 2018

journals/bioinformatics/SahraeianY12

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

release_o2dzq3ld6rckxjhbhggqecznje

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/o2dzq3ld6rckxjhbhggqecznje

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

4 February 2018