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Accurate detection of chemical modifications in RNA by mutational profiling (MaP) with ShapeMapper 2.
scientific article published on 7 November 2017
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1 reference
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Europe PubMed Central
PMCID
5769742
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29114018%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
title
Accurate detection of chemical modifications in RNA by mutational profiling (MaP) with ShapeMapper 2
(English)
1 reference
stated in
Europe PubMed Central
PMCID
5769742
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29114018%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
author
Kevin M Weeks
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
5769742
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29114018%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
author name string
Steven Busan
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
5769742
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29114018%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
language of work or name
English
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publication date
7 November 2017
1 reference
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Europe PubMed Central
PMCID
5769742
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29114018%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
published in
RNA
1 reference
stated in
Europe PubMed Central
PMCID
5769742
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29114018%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
volume
24
1 reference
stated in
Europe PubMed Central
PMCID
5769742
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29114018%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
issue
2
1 reference
stated in
Europe PubMed Central
PMCID
5769742
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29114018%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
page(s)
143-148
1 reference
stated in
Europe PubMed Central
PMCID
5769742
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29114018%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
cites work
Packaged and Free Satellite Tobacco Mosaic Virus (STMV) RNA Genomes Adopt Distinct Conformational States.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
Direct identification of base-paired RNA nucleotides by correlated chemical probing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
SHAPE reveals transcript-wide interactions, complex structural domains, and protein interactions across the Xist lncRNA in living cells.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
Detection of RNA-Protein Interactions in Living Cells with SHAPE.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
Selective 2'-hydroxyl acylation analyzed by primer extension and mutational profiling (SHAPE-MaP) for direct, versatile and accurate RNA structure analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
Bias in ligation-based small RNA sequencing library construction is determined by adaptor and RNA structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
SHAPE Selection (SHAPES) enrich for RNA structure signal in SHAPE sequencing-based probing data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
Structural imprints in vivo decode RNA regulatory mechanisms
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
Review toward all RNA structures, concisely
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
RiboVision suite for visualization and analysis of ribosomes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
Genome-wide profiling of mouse RNA secondary structures reveals key features of the mammalian transcriptome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
SHAPE-Seq 2.0: systematic optimization and extension of high-throughput chemical probing of RNA secondary structure with next generation sequencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
Single-molecule correlated chemical probing of RNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
RNA motif discovery by SHAPE and mutational profiling (SHAPE-MaP).
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
Evaluating bias-reducing protocols for RNA sequencing library preparation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
Mod-seq: high-throughput sequencing for chemical probing of RNA structure
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
Determination of in vivo RNA structure in low-abundance transcripts.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
STAR: ultrafast universal RNA-seq aligner
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
Fast gapped-read alignment with Bowtie 2
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
Use of specific chemical reagents for detection of modified nucleotides in RNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
Advances in RNA structure analysis by chemical probing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
RNAstructure: software for RNA secondary structure prediction and analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
Accurate SHAPE-directed RNA structure determination
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
DMS footprinting of structured RNAs and RNA-protein complexes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
A fast-acting reagent for accurate analysis of RNA secondary and tertiary structure by SHAPE chemistry
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
Probing the structure of RNAs in solution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5769742
retrieved
29 September 2018
Identifiers
DOI
10.1261/RNA.061945.117
1 reference
stated in
Europe PubMed Central
PMCID
5769742
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29114018%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
PMCID
5769742
1 reference
stated in
Europe PubMed Central
PMCID
5769742
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29114018%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
PubMed ID
29114018
1 reference
stated in
Europe PubMed Central
PMCID
5769742
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29114018%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 April 2020
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