(Q47858992)

6 February 2018

title

Circular dichroism of protein-folding intermediates (English)

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6 February 2018

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Robert W Woody

1

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6 February 2018

language of work or name

English

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publication date

1 January 2004

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6 February 2018

published in

Methods in Enzymology

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6 February 2018

volume

380

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6 February 2018

page(s)

242-285

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6 February 2018

Protein Folding: A Perspective from Theory and Experiment.

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Three-state denaturation of α-lactalbumin by guanidine hydrochloride

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A folding model of alpha-lactalbumin deduced from the three-state denaturation mechanism

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Detection and characterization of the intermediate on the folding pathway of human alpha-lactalbumin

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‘Molten‐globule state’: a compact form of globular proteins with mobile side‐chains

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Role of the molten globule state in protein folding.

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Compact intermediate states in protein folding.

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The molten globule state as a clue for understanding the folding and cooperativity of globular-protein structure.

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The isolated C-terminal (F2) fragment of the Escherichia coli tryptophan synthase beta 2-subunit folds into a stable, organized nonnative conformation.

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Kinetic resolution of peptide bond and side chain far-UV circular dichroism during the folding of hen egg white lysozyme

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The "pre-molten globule," a new intermediate in protein folding

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7 January 2021

"Partly folded" state, a new equilibrium state of protein molecules: four-state guanidinium chloride-induced unfolding of beta-lactamase at low temperature.

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7 January 2021

Ca2+-induced alteration in the unfolding behavior of alpha-lactalbumin

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7 January 2021

Comparison of the transient folding intermediates in lysozyme and alpha-lactalbumin

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7 January 2021

Native-like secondary structure of molten globules.

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7 January 2021

Structure and stability of the molten globule state of guinea-pig alpha-lactalbumin: a hydrogen exchange study

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7 January 2021

Circular dichroism spectra of α-lactalbumin

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7 January 2021

Empirical studies of protein secondary structure by vibrational circular dichroism and related techniques. Alpha-lactalbumin and lysozyme as examples

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7 January 2021

Computed circular dichroism spectra for the evaluation of protein conformation

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7 January 2021

Estimation of globular protein secondary structure from circular dichroism.

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7 January 2021

Determination of the helix and beta form of proteins in aqueous solution by circular dichroism.

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7 January 2021

Statistical analyses of the vibrational circular dichroism of selected proteins and relationship to secondary structures.

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7 January 2021

Extending CD spectra of proteins to 168 nm improves the analysis for secondary structures

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7 January 2021

Estimation of protein secondary structure from circular dichroism spectra: comparison of CONTIN, SELCON, and CDSSTR methods with an expanded reference set

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7 January 2021

Variable selection method improves the prediction of protein secondary structure from circular dichroism spectra

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7 January 2021

A self-consistent method for the analysis of protein secondary structure from circular dichroism.

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7 January 2021

Characterization of a partly folded protein by NMR methods: studies on the molten globule state of guinea pig alpha-lactalbumin

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7 January 2021

A residue-specific NMR view of the non-cooperative unfolding of a molten globule

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7 January 2021

Different subdomains are most protected from hydrogen exchange in the molten globule and native states of human alpha-lactalbumin

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7 January 2021

Solvent-induced distortions and the curvature of alpha-helices

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7 January 2021

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7 January 2021

Alpha-Lactalbumin: compact state with fluctuating tertiary structure?

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7 January 2021

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

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7 January 2021

Automatic identification of secondary structure in globular proteins

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7 January 2021

Assignment of the contribution of the tryptophan residues to the circular dichroism spectrum of human carbonic anhydrase II.

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7 January 2021

Role of conserved residues in structure and stability: Tryptophans of human serum retinol-binding protein, a model for the lipocalin superfamily

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7 January 2021

Partially folded states of equine lysozyme. Structural characterization and significance for protein folding

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https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Equilibrium and kinetic studies on folding of canine milk lysozyme

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https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Structural characterisation and comparison of the native and A-states of equine lysozyme.

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7 January 2021

Structure and thermodynamics of the extraordinarily stable molten globule state of canine milk lysozyme

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7 January 2021

Transient intermediates in the folding of dihydrofolate reductase as detected by far-ultraviolet circular dichroism spectroscopy.

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https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Contributions of tryptophan side chains to the circular dichroism of globular proteins: exciton couplets and coupled oscillators

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7 January 2021

Conformational states of beta-lactamase: molten-globule states at acidic and alkaline pH with high salt

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https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Acid-induced folding of proteins

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https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Classification of acid denaturation of proteins: intermediates and unfolded states

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https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

The equilibrium intermediate of beta-lactoglobulin with non-native alpha-helical structure

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https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

The structure of β-lactoglobulin and its similarity to plasma retinol-binding protein

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Non-native alpha-helical intermediate in the refolding of beta-lactoglobulin, a predominantly beta-sheet protein

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Crystal structure of the trigonal form of bovine beta-lactoglobulin and of its complex with retinol at 2.5 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Two-phase induction of the nonnative alpha-helical form of beta-lactoglobulin in the presence of trifluoroethanol.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Trifluoroethanol-induced stabilization of the alpha-helical structure of beta-lactoglobulin: implication for non-hierarchical protein folding

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Predicting protein secondary structure based on amino acid sequence

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

High helical propensity of the peptide fragments derived from beta-lactoglobulin, a predominantly beta-sheet protein

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https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

LINUS: a hierarchic procedure to predict the fold of a protein.

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https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Is protein folding hierarchic? II. Folding intermediates and transition states

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https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Equilibrium folding studies of cellular retinoic acid binding protein, a predominantly beta-sheet protein

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Protein folding intermediates with rapidly exchangeable amide protons contain authentic hydrogen-bonded secondary structures.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Exchange kinetics of individual amide protons in 15N-labeled helical peptides measured by isotope-edited NMR.

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https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Rapid formation of secondary structure framework in protein folding studied by stopped-flow circular dichroism

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7 January 2021

Formation of a molten globule intermediate early in the kinetic folding pathway of apomyoglobin

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7 January 2021

Detection of two partially structured species in the folding process of the amyloidogenic protein beta 2-microglobulin

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7 January 2021

Structure of a rapidly formed intermediate in ribonuclease T1 folding

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7 January 2021

Early steps in cytochrome c folding probed by time-resolved circular dichroism and fluorescence spectroscopy

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7 January 2021

Folding mechanism of indole-3-glycerol phosphate synthase from Sulfolobus solfataricus: a test of the conservation of folding mechanisms hypothesis in (beta(alpha))(8) barrels

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7 January 2021

Kinetics of folding of the all-beta sheet protein interleukin-1 beta

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7 January 2021

The folding of hen lysozyme involves partially structured intermediates and multiple pathways

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7 January 2021

Folding kinetics of the protein pectate lyase C reveal fast-forming intermediates and slow proline isomerization

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https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Folding of a predominantly beta-structure protein: rat intestinal fatty acid binding protein.

1 reference

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7 January 2021

Circular dichroism evidence for the presence of burst-phase intermediates on the conformational folding pathway of ribonuclease A

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7 January 2021

Folding pathway of Escherichia coli ribonuclease HI: a circular dichroism, fluorescence, and NMR study.

1 reference

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7 January 2021

Folding of staphylococcal nuclease A studied by equilibrium and kinetic circular dichroism spectra

1 reference

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7 January 2021

An early immunoreactive folding intermediate of the tryptophan synthease beta 2 subunit is a 'molten globule'.

1 reference

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7 January 2021

A possible initial folding intermediate: the C-terminal proteolytic domain of tryptophan synthase beta chains folds in less than 4 milliseconds into a condensed state with non-native-like secondary structure

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Rapid formation of a molten globule intermediate in refolding of alpha-lactalbumin

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7 January 2021

Rapid collapse and slow structural reorganisation during the refolding of bovine α-lactalbumin 1 1Edited by P. E. Wright

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7 January 2021

Following protein folding in real time using NMR spectroscopy

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7 January 2021

Compactness of the kinetic molten globule of bovine alpha-lactalbumin: a dynamic light scattering study

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7 January 2021

Partially unfolded equilibrium state of hen lysozyme studied by circular dichroism spectroscopy

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https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

The structure of triclinic lysozyme at 2-5 A resolution.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Determination of protein secondary structure in solution by vacuum ultraviolet circular dichroism

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Circular dichroism spectroscopy of bovine pancreatic trypsin inhibitor and five altered conformational states. Relationship of conformation and the refolding pathway of the trypsin inhibitor

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Contributions of tryptophan side chains to the far-ultraviolet circular dichroism of proteins.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Independent Nucleation and Heterogeneous Assembly of Structure During Folding of Equine Lysozyme

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

The burst-phase intermediate in the refolding of beta-lactoglobulin studied by stopped-flow circular dichroism and absorption spectroscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Kinetic refolding of beta-lactoglobulin. Studies by synchrotron X-ray scattering, and circular dichroism, absorption and fluorescence spectroscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Is folding of beta-lactoglobulin non-hierarchic? Intermediate with native-like beta-sheet and non-native alpha-helix

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Folding-unfolding equilibrium and kinetics of equine beta-lactoglobulin: equivalence between the equilibrium molten globule state and a burst-phase folding intermediate

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https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Ultrafast signals in protein folding and the polypeptide contracted state

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https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

The structure of hemopeptide 1-65 from cytochrome c

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Stepwise formation of alpha-helices during cytochrome c folding

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Evidence for barrier-limited protein folding kinetics on the microsecond time scale

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Compactness of the denatured state of a fast-folding protein measured by submillisecond small-angle x-ray scattering

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Estimation of protein secondary structure from circular dichroism spectra: inclusion of denatured proteins with native proteins in the analysis

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Far-UV Time-Resolved Circular Dichroism Detection of Electron-Transfer-Triggered CytochromecFolding

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Time-resolved circular dichroism studies of protein folding intermediates of cytochrome c.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

A very fast phase in the refolding of disulfide-intact ribonuclease A: implications for the refolding and unfolding pathways

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

The burst phase in ribonuclease A folding and solvent dependence of the unfolded state.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Primary structure effects on peptide group hydrogen exchange

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Is polyproline II a major backbone conformation in unfolded proteins?

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

The kinetic folding intermediate of ribonuclease H resembles the acid molten globule and partially unfolded molecules detected under native conditions.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Three-state analysis of sperm whale apomyoglobin folding

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Structure and stability of a second molten globule intermediate in the apomyoglobin folding pathway

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Comparison of equilibrium and kinetic approaches for determining protein folding mechanisms

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Folding and stability of a tryptophan-containing mutant of ubiquitin.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Circular dichroic analysis of protein conformation: inclusion of the beta-turns.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Effects of multiple replacements at a single position on the folding and stability of dihydrofolate reductase from Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Folding of dihydrofolate reductase from Escherichia coli.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

A hydrophobic cluster forms early in the folding of dihydrofolate reductase

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

New domain motif: the structure of pectate lyase C, a secreted plant virulence factor

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Identification of proline residues responsible for the slow folding kinetics in pectate lyase C by mutagenesis

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

Stability of proteins: small globular proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

The denaturation of beta-lactoglobulin-A at pH 2.

1 reference

https://api.crossref.org/works/10.1016%2FS0076-6879%2804%2980012-0

7 January 2021

10.1016/S0076-6879(04)80012-0

Identifiers

DOI

1 reference

6 February 2018

1 reference

6 February 2018