(Q47923424)

6 February 2018

title

Ribosomal proteins S5 and L6: high-resolution crystal structures and roles in protein synthesis and antibiotic resistance (English)

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6 February 2018

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antibiotic resistance

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3

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6 February 2018

Venkatraman Ramakrishnan

5

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6 February 2018

author name string

Davies C

1

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6 February 2018

Bussiere DE

2

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6 February 2018

Porter SJ

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6 February 2018

White SW

6

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language of work or name

English

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publication date

1 June 1998

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6 February 2018

Journal of Molecular Biology

published in

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6 February 2018

volume

279

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6 February 2018

issue

4

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6 February 2018

page(s)

873-888

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6 February 2018

Crystal structure of the RNA-binding domain of the U1 small nuclear ribonucleoprotein A

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Alteration of ribosomal protein L6 in mutants of Escherichia coli resistant to gentamicin

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Antibiotic resistance mutations in 16S and 23S ribosomal RNA genes ofEscherichia coli

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RNA-protein cross-linking in Escherichia coli 30S ribosomal subunits; determination of sites on 16S RNA that are cross-linked to proteins S3, S4, S5, S7, S8, S9, S11, S13, S19 and S21 by treatment with methyl p-azidophenyl acetimidate

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A mutation in the 530 loop of Escherichia coli 16S ribosomal RNA causes resistance to streptomycin

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A photolabile oligodeoxyribonucleotide probe of the decoding site in the small subunit of the Escherichia coli ribosome: identification of neighboring ribosomal components

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30S subunit mutations relieving restriction of ribosomal misreading caused by L6 mutations.

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Mutations in the 915 region ofEscherichia coli16S ribosomal RNA reduce the binding of streptomycin to the ribosome

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EFTu provides an internal kinetic standard for translational accuracy

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Ribosomal Protein L9: A Structure Determination by the Combined Use of X-ray Crystallography and NMR Spectroscopy

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Three widely separated positions in the 16S RNA lie in or close to the ribosomal decoding region; a site-directed cross-linking study with mRNA analogues

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9 October 2022

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The location of mRNA in the ribosomal 30S initiation complex; site-directed cross-linking of mRNA analogues carrying several photo-reactive labels simultaneously on either side of the AUG start codon

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Crystal structure at 1.92 A resolution of the RNA-binding domain of the U1A spliceosomal protein complexed with an RNA hairpin

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9 October 2022

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Localization of functional centers on the prokaryotic ribosome: immuno-electron microscopy approach

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9 October 2022

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Selective inhibition of initiating ribosomes by spectinomycin

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Immunoelectron microscopy of ribosomes

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9 October 2022

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Protein-rRNA binding features and their structural and functional implications in ribosomes as determined by cross-linking studies.

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9 October 2022

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A detailed model of the three-dimensional structure of Escherichia coli 16 S ribosomal RNA in situ in the 30 S subunit

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

An experimentally-derived model for the secondary structure of the 16S ribosomal RNA from Escherichia coli

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Effect of different mutaions in ribosomal protein S5 of Escherichia coli on translational fidelity

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Immunoelectron microscopy of ribosomes carrying a fluorescence label in a defined position. Location of proteins S17 and L6 in the ribosome of Escherichia coli

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Structure of the dsRNA binding domain of E. coli RNase III.

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Interaction of antibiotics with functional sites in 16S ribosomal RNA

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Ribosomal components neighboring the conserved 518-533 loop of 16S rRNA in 30S subunits

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Structural evidence for specific S8-RNA and S8-protein interactions within the 30S ribosomal subunit: ribosomal protein S8 from Bacillus stearothermophilus at 1.9 A resolution

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

RNA-protein interactions in 30S ribosomal subunits: folding and function of 16S rRNA.

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Immunoelectron microscopic localisation of ribosomal proteins from Bacillus stearothermophilus that are homologous to Escherichia coli L1, L6, L23 and L29.

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

The structure of ribosomal protein S5 reveals sites of interaction with 16S rRNA

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Genetic position and amino acid replacements of several mutations in ribosomal protein S5 from Escherichia coli

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

RNA-binding domain of the A protein component of the U1 small nuclear ribonucleoprotein analyzed by NMR spectroscopy is structurally similar to ribosomal proteins

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Bacterial-protein synthesis. A novel system for studying antibiotic action in vivo

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9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

The subunit interface of the Escherichia coli ribosome. Identification of proteins at the interface between the 30 S and 50 S subunits by crosslinking with 2-iminothiolane

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Selective perturbation of G530 of 16 S rRNA by translational miscoding agents and a streptomycin-dependence mutation in protein S12.

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

A model for the spatial arrangement of the proteins in the large subunit of the Escherichia coli ribosome.

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

A single base mutation at position 2661 in E. coli 23S ribosomal RNA affects the binding of ternary complex to the ribosome.

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

A complete mapping of the proteins in the small ribosomal subunit of Escherichia coli.

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Crosslinks between ribosomal proteins of 30S subunits in 70S tight couples and in 30S subunits

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Ribosomal protein L6: structural evidence of gene duplication from a primitive RNA binding protein

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Ribosomal protein S17: Characterization of the three-dimensional structure by proton and nitrogen-15 NMR

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Interaction of tRNA with 23S rRNA in the ribosomal A, P, and E sites

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

The three-dimensional structures of two complexes between recombinant MS2 capsids and RNA operator fragments reveal sequence-specific protein-RNA interactions

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

The KH module has an αβ fold

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Ribosomal protein structures: insights into the architecture, machinery and evolution of the ribosome

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Visualization of elongation factor Tu on the Escherichia coli ribosome.

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Conserved structures and diversity of functions of RNA-binding proteins

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Interaction of elongation factors EF-G and EF-Tu with a conserved loop in 23S RNA.

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Domain VI of Escherichia coli 23 S ribosomal RNA. Structure, assembly and function

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Assessment by sedimentation equilibrium analysis of a heterologous macromolecular interaction in the presence of self-association: interaction of S5 with S8

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Ribosomal Protein Conferring Sensitivity to the Antibiotic Spectinomycin in Escherichia coli

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Alteration of ribosomal protein L6 in gentamicin-resistant strains of Escherichia coli. Effects on fidelity of protein synthesis

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

PHENOTYPIC REPAIR BY STREPTOMYCIN OF DEFECTIVE GENOTYPES IN E. COLI

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Model for the three-dimensional folding of 16 S ribosomal RNA

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

The structure of ribosomal protein S7 at 1.9 A resolution reveals a beta-hairpin motif that binds double-stranded nucleic acids

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

The spc ribosomal protein operon of Escherichia coli: sequence and cotranscription of the ribosomal protein genes and a protein export gene

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Free R value: a novel statistical quantity for assessing the accuracy of crystal structures

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Clustering of modified nucleotides at the functional center of bacterial ribosomal RNA

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

A conformational switch in Escherichia coli 16S ribosomal RNA during decoding of messenger RNA.

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Photo-affinity labelling at the peptidyl transferase centre reveals two different positions for the A- and P-sites in domain V of 23S rRNA

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Site-directed hydroxyl radical probing of the rRNA neighborhood of ribosomal protein S5.

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Improved methods for building protein models in electron density maps and the location of errors in these models

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Aromatic-aromatic interaction: a mechanism of protein structure stabilization

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Mutations in ribosomal proteins S4 and S12 influence the higher order structure of 16 S ribosomal RNA.

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

A ribosomal protein module in EF-G and DNA gyrase.

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Chemical cross-linking of elongation factor G to both subunits of the 70-S ribosomes from Escherichia coli

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Single-base mutations at position 2661 of Escherichia coli 23S rRNA increase efficiency of translational proofreading

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

The use of 2-iminothiolane as an RNA-protein cross-linking agent in Escherichia coli ribosomes, and the localisation on 23S RNA of sites cross-linked to proteins L4, L6, L21, L23, L27 and L29

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

1 reference

9 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1006/JMBI.1998.1780

Identifiers

DOI

10.1006/JMBI.1998.1780

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6 February 2018

1 reference

6 February 2018