(Q48041899)

English

Whole-genome consensus sequence analysis of a South African rotavirus SA11 sample reveals a mixed infection with two close derivatives of the SA11-H96 strain

scientific article published on 23 December 2012

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scholarly article

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Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23263646

Whole-genome consensus sequence analysis of a South African rotavirus SA11 sample reveals a mixed infection with two close derivatives of the SA11-H96 strain (English)

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Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23263646

whole genome sequencing

1 reference

based on heuristic

inferred from title

Khuzwayo C. Jere

3

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23263646

author name string

Luwanika Mlera

1

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23263646

Hester G O'Neill

2

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23263646

Alberdina A van Dijk

4

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23263646

publication date

23 December 2012

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Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23263646

number of pages

10

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Archives of Virology

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Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23263646

158

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23263646

5

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23263646

1021-1030

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23263646

Culturing, storage, and quantification of rotaviruses.

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

How RNA viruses maintain their genome integrity

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Genetic stability of a porcine rotavirus RNA segment during repeated plaque isolation

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Serotype-specific glycoprotein of simian 11 rotavirus: coding assignment and gene sequence

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Viral quasispecies evolution

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Structural rearrangements in the membrane penetration protein of a non-enveloped virus

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Bayesian coalescent inference of past population dynamics from molecular sequences

1 reference

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21 January 2018

BEAST: Bayesian evolutionary analysis by sampling trees

1 reference

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21 January 2018

Rates of evolutionary change in viruses: patterns and determinants

1 reference

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21 January 2018

Active participation of cellular chaperone Hsp90 in regulating the function of rotavirus nonstructural protein 3 (NSP3).

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Phylogenies from molecular sequences: inference and reliability

1 reference

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21 January 2018

VISTA: computational tools for comparative genomics

1 reference

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Dating of the human-ape splitting by a molecular clock of mitochondrial DNA

1 reference

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The Ka/Ks ratio: diagnosing the form of sequence evolution

1 reference

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21 January 2018

Rates of molecular evolution in RNA viruses: a quantitative phylogenetic analysis

1 reference

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21 January 2018

Whole genome analyses of African G2, G8, G9, and G12 rotavirus strains using sequence-independent amplification and 454® pyrosequencing

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Whole genome analysis of multiple rotavirus strains from a single stool specimen using sequence-independent amplification and 454® pyrosequencing reveals evidence of intergenotype genome segment recombination

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Confidence intervals for the coefficient of variation for the normal and log normal distributions

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Full genome analysis of group B rotaviruses from western India: genetic relatedness and evolution

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Nucleotide sequence of the simian rotavirus SA11 genome segment 3.

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Mechanism for Coordinated RNA Packaging and Genome Replication by Rotavirus Polymerase VP1

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

RotaC: a web-based tool for the complete genome classification of group A rotaviruses

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Full genome-based classification of rotaviruses reveals a common origin between human Wa-Like and porcine rotavirus strains and human DS-1-like and bovine rotavirus strains

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Phylodynamic analyses of rotavirus genotypes G9 and G12 underscore their potential for swift global spread.

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Simian rotaviruses possess divergent gene constellations that originated from interspecies transmission and reassortment.

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Conservation of a potential metal binding motif despite extensive sequence diversity in the rotavirus nonstructural protein NS53.

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Determination of the whole-genome consensus sequence of the prototype DS-1 rotavirus using sequence-independent genome amplification and 454® pyrosequencing

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Rotavirus genome segment 7 (NSP3) is a determinant of extraintestinal spread in the neonatal mouse

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Rotavirus RNA polymerases resolve into two phylogenetically distinct classes that differ in their mechanism of template recognition

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Rotavirus and severe childhood diarrhea

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Effect of intragenic rearrangement and changes in the 3' consensus sequence on NSP1 expression and rotavirus replication

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

A comparison of simian rotavirus SA11 preparations maintained in different laboratories

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

jModelTest: phylogenetic model averaging

1 reference

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21 January 2018

Improved strategies for sequence-independent amplification and sequencing of viral double-stranded RNA genomes

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Application of next-generation sequencing technologies in virology

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Sequence analysis and evolution of group B rotaviruses

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Genetics of the rotaviruses

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Viral mutation rates

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Genome heterogeneity of SA11 rotavirus due to reassortment with "O" agent

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Prospects for inferring very large phylogenies by using the neighbor-joining method

1 reference

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21 January 2018

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

1 reference

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21 January 2018

A base-specific recognition signal in the 5' consensus sequence of rotavirus plus-strand RNAs promotes replication of the double-stranded RNA genome segments

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Bioinformatic prediction of polymerase elements in the rotavirus VP1 protein.

1 reference

https://api.crossref.org/works/10.1007%2FS00705-012-1559-5

21 January 2018

Next-generation sequencing: from basic research to diagnostics

1 reference

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21 January 2018

Phylogenetic analysis of a human group B rotavirus WH-1 detected in China in 2002.

1 reference

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21 January 2018

Statistical methods for detecting molecular adaptation

1 reference

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21 January 2018

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10.1007/S00705-012-1559-5

1 reference

Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23263646

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https://api.fatcat.wiki/v0/release/42iskuc4knhlbhkbtwluadu2fa

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Europe PubMed Central

PubMed publication ID

7 February 2018

http://europepmc.org/abstract/MED/23263646

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