(Q48076362)

8 February 2018

title

TEnest: automated chronological annotation and visualization of nested plant transposable elements (English)

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8 February 2018

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2

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8 February 2018

author name string

Brent A Kronmiller

series ordinal

1

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8 February 2018

language of work or name

English

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publication date

21 November 2007

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8 February 2018

published in

Plant Physiology

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8 February 2018

volume

146

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8 February 2018

issue

1

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8 February 2018

page(s)

45-59

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8 February 2018

Creative Commons Attribution 4.0 International

copyright license

start time

25 January 2021

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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Physical and genetic structure of the maize genome reflects its complex evolutionary history

26 August 2018

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Types and rates of sequence evolution at the high-molecular-weight glutenin locus in hexaploid wheat and its ancestral genomes

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The maize genome as a model for efficient sequence analysis of large plant genomes

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De novo identification of repeat families in large genomes

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Evolution of DNA sequence nonhomologies among maize inbreds

26 August 2018

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Comparative sequence analysis of the region harboring the hardness locus in barley and its colinear region in rice.

26 August 2018

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The maize genome contains a helitron insertion

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Intraspecific violation of genetic colinearity and its implications in maize

26 August 2018

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Recombination rates between adjacent genic and retrotransposon regions in maize vary by 2 orders of magnitude

26 August 2018

1 reference

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Sequence, regulation, and evolution of the maize 22-kD alpha zein gene family

26 August 2018

1 reference

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Abundance, distribution, and transcriptional activity of repetitive elements in the maize genome

26 August 2018

1 reference

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Initial sequencing and analysis of the human genome

26 August 2018

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Transposable elements and host genome evolution

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2230558

Colinearity and its exceptions in orthologous adh regions of maize and sorghum

26 August 2018

1 reference

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The paleontology of intergene retrotransposons of maize

26 August 2018

1 reference

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Nested retrotransposons in the intergenic regions of the maize genome

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2230558

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

26 August 2018

1 reference

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A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

26 August 2018

1 reference

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Transcription and reverse transcription of retrotransposons

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2230558

Characterization of the repetitive sequences in a 200-kb region around the rice waxy locus: diversity of transposable elements and presence of veiled repetitive sequences

26 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18032588

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Access to the maize genome: an integrated physical and genetic map

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18032588

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1104/PP.107.110353

1 reference

8 February 2018

PMC publication ID

2230558

0 references

1 reference

8 February 2018