(Q48081354)

8 February 2018

title

A third broad lineage of major histocompatibility complex (MHC) class I in teleost fish; MHC class II linkage and processed genes. (English)

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8 February 2018

author name string

Johannes Martinus Dijkstra

1

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8 February 2018

Takayuki Katagiri

2

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8 February 2018

Kazuyoshi Hosomichi

3

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8 February 2018

Kazuyo Yanagiya

4

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8 February 2018

Hidetoshi Inoko

5

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8 February 2018

Mitsuru Ototake

6

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8 February 2018

Takashi Aoki

7

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8 February 2018

Keiichiro Hashimoto

8

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8 February 2018

Takashi Shiina

9

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8 February 2018

language of work or name

English

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publication date

23 February 2007

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8 February 2018

published in

Immunogenetics

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8 February 2018

volume

59

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8 February 2018

issue

4

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8 February 2018

page(s)

305-321

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8 February 2018

https://scigraph.springernature.com/pub.10.1007/s00251-007-0198-6

exact match

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cites work

Classical MHC class I genes composed of highly divergent sequence lineages share a single locus in rainbow trout (Oncorhynchus mykiss).

1 reference

https://api.crossref.org/works/10.1007%2FS00251-007-0198-6

Integrating genomics, bioinformatics, and classical genetics to study the effects of recombination on genome evolution

21 January 2018

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New MHC class Ia domain lineages in rainbow trout (Oncorhynchus mykiss) which are shared with other fish species

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00251-007-0198-6

A novel functional class I lineage in zebrafish (Danio rerio), carp (Cyprinus carpio), and large barbus (Barbus intermedius) showing an unusual conservation of the peptide binding domains

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00251-007-0198-6

A contig map of the Mhc class I genomic region in the zebrafish reveals ancient synteny

21 January 2018

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Major histocompatibility lineages and immune gene function in teleost fishes: the road not taken

21 January 2018

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Nature and structure of human genes that generate retropseudogenes

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12 December 2020

Sequence analysis of a rainbow trout cDNA library and creation of a gene index

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12 December 2020

Interchromosomal duplication of major histocompatibility complex class I regions in rainbow trout (Oncorhynchus mykiss), a species with a presumably recent tetraploid ancestry.

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Molecular reconstruction of Sleeping Beauty, a Tc1-like transposon from fish, and its transposition in human cells

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Expression, linkage, and polymorphism of MHC-related genes in rainbow trout, Oncorhynchus mykiss.

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Mitogenomic analyses of deep gnathostome divergences: a fish is a fish

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Nomenclature for the major histocompatibility complexes of different species: a proposal.

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Human testis expresses a specific poly(A)-binding protein

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Cytotoxic T cell function in fish

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Replacement of N-glycosylation sites on the MHC class II E alpha chain. Effect on thymic selection and peripheral T cell activation

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The GC-rich transposon Bytmar1 from the deep-sea hydrothermal crab, Bythograea thermydron, may encode three transposase isoforms from a single ORF.

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An ultracentrifugation analysis of two hundred fish genomes

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Novel evolutionary relationship among four fish model systems.

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Structure and expression of class II alpha genes in miniature swine

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Major histocompatibility complex class I genes of the coelacanth Latimeria chalumnae

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Zebrafish Mhc class II alpha chain-encoding genes: polymorphism, expression, and function

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Transcribed processed pseudogenes in the human genome: an intermediate form of expressed retrosequence lacking protein-coding ability

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Mhc class I gene of African lungfish

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Functional evolution of ADAMTS genes: evidence from analyses of phylogeny and gene organization

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Conservation and diversification of MHC class I and its related molecules in vertebrates

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Molecular cloning and linkage analysis of complement C3 and C4 genes of the Japanese medaka fish

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Comparative genomic analysis of the MHC: the evolution of class I duplication blocks, diversity and complexity from shark to man.

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Evolutionary fate of retroposed gene copies in the human genome

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Alpha1 and alpha2 domains of Aotus MHC class I and Catarrhini MHC class Ia share similar characteristics.

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Millions of years of evolution preserved: a comprehensive catalog of the processed pseudogenes in the human genome

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MHC class I-processed pseudogenes in New World primates provide evidence for rapid turnover of MHC class I genes.

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Major histocompatibility genes in cyprinid fishes: theory and practice

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Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype

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A family of Tc1-like transposons from the genomes of fishes and frogs: evidence for horizontal transmission.

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Genomic bacterial artificial chromosome library of the Japanese flounder Paralichthys olivaceus

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Structure of the human class I histocompatibility antigen, HLA-A2

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Sequence, expression, and location of zebrafish frizzled 10.

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Codon usage bias and base composition in MHC genes in humans and common chimpanzees

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Unprecedented intraspecific diversity of the MHC class I region of a teleost medaka, Oryzias latipes

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Organization of Mhc class II B genes in the zebrafish (Brachydanio rerio).

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Substitution at residue 227 of H-2 class I molecules abrogates recognition by CD8-dependent, but not CD8-independent, cytotoxic T lymphocytes

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The mouse kinome: discovery and comparative genomics of all mouse protein kinases

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Mammalian retroelements.

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Gene repeat expansion and contraction by spontaneous intrachromosomal homologous recombination in mammalian cells

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12 December 2020

Fugu genome analysis provides evidence for a whole-genome duplication early during the evolution of ray-finned fishes

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12 December 2020

Construction and characterization of BAC libraries for three fish species; rainbow trout, carp and tilapia

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12 December 2020

The rainbow trout classical MHC class I molecule Onmy-UBA*501 is expressed in similar cell types as mammalian classical MHC class I molecules

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12 December 2020

Evolution of the initiating enzymes of the complement system

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12 December 2020

Gene duplication and the uniqueness of vertebrate genomes circa 1970-1999.

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12 December 2020

Evolution of the major histocompatibility complex: independent origin of nonclassical class I genes in different groups of mammals

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12 December 2020

Nucleotide sequence of the MHC class I genomic region of a teleost, the medaka (Oryzias latipes)

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12 December 2020

Functions of nonclassical MHC and non-MHC-encoded class I molecules.

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12 December 2020

The orthology of HLA-E and H2-Qa1 is hidden by their concerted evolution with other MHC class I molecules.

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12 December 2020

Primitive synteny of vertebrate major histocompatibility complex class I and class II genes

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12 December 2020

Prediction of protein antigenic determinants from amino acid sequences

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12 December 2020

Analysis of zebrafish Mhc using BAC clones

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12 December 2020

Human genome sequence variation and the influence of gene history, mutation and recombination

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12 December 2020

Nonlinkage of major histocompatibility complex class I and class II loci in bony fishes

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12 December 2020

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12 December 2020

The class II molecules of the human and murine major histocompatibility complex.

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12 December 2020

Major events in the genome evolution of vertebrates: paranome age and size differ considerably between ray-finned fishes and land vertebrates

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12 December 2020

Crystal structures of RAE-1beta and its complex with the activating immunoreceptor NKG2D

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12 December 2020

A genome-wide survey of Major Histocompatibility Complex (MHC) genes and their paralogues in zebrafish

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12 December 2020

MHC-dependent antigen processing and peptide presentation: providing ligands for T lymphocyte activation

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12 December 2020

The major histocompatibility complex in monotremes: an analysis of the evolution of Mhc class I genes across all three mammalian subclasses

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12 December 2020

Isolation of carp genes encoding major histocompatibility complex antigens

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12 December 2020

A novel type of class I gene organization in vertebrates: a large family of non-MHC-linked class I genes is expressed at the RNA level in the amphibian Xenopus

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12 December 2020

The three-dimensional structure of peptide-MHC complexes

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12 December 2020

Detection of a putative HLA-A*31012 processed (intronless) pseudogene in a laryngeal squamous cell carcinoma

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12 December 2020

Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes

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12 December 2020

RNAs from all categories generate retrosequences that may be exapted as novel genes or regulatory elements

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12 December 2020

Fugu orthologues of human major histocompatibility complex genes: a genome survey

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12 December 2020

A novel class of mammalian-specific tailless retropseudogenes

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12 December 2020

The MHC class I linkage group is a major determinant in the in vivo rejection of allogeneic erythrocytes in rainbow trout (Oncorhynchus mykiss).

1 reference

12 December 2020

Mapping of mhc class I and class II regions to different linkage groups in the zebrafish, Danio rerio

1 reference

12 December 2020

Transcribed Tc1-like transposons in salmonid fish

1 reference

12 December 2020

10.1007/S00251-007-0198-6

Identifiers

DOI

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8 February 2018

PubMed ID

17318646

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8 February 2018