(Q48116617)

English

Design of PCR primers and gene probes for the general detection of bacterial populations capable of degrading aromatic compounds via catechol cleavage pathways.

scientific article

In more languages

Statements

scholarly article

1 reference

Europe PubMed Central

8 February 2018

http://europepmc.org/abstract/MED/16232659

Design of PCR primers and gene probes for the general detection of bacterial populations capable of degrading aromatic compounds via catechol cleavage pathways. (English)

1 reference

Europe PubMed Central

8 February 2018

http://europepmc.org/abstract/MED/16232659

author name string

Sei K

1

1 reference

Europe PubMed Central

8 February 2018

http://europepmc.org/abstract/MED/16232659

Asano K

2

1 reference

Europe PubMed Central

8 February 2018

http://europepmc.org/abstract/MED/16232659

Tateishi N

3

1 reference

Europe PubMed Central

8 February 2018

http://europepmc.org/abstract/MED/16232659

Mori K

4

1 reference

Europe PubMed Central

8 February 2018

http://europepmc.org/abstract/MED/16232659

Ike M

5

1 reference

Europe PubMed Central

8 February 2018

http://europepmc.org/abstract/MED/16232659

Fujita M

6

1 reference

Europe PubMed Central

8 February 2018

http://europepmc.org/abstract/MED/16232659

publication date

1 January 1999

1 reference

Europe PubMed Central

8 February 2018

http://europepmc.org/abstract/MED/16232659

Journal of Bioscience and Bioengineering

1 reference

Europe PubMed Central

8 February 2018

http://europepmc.org/abstract/MED/16232659

88

1 reference

Europe PubMed Central

8 February 2018

http://europepmc.org/abstract/MED/16232659

542-550

1 reference

Europe PubMed Central

8 February 2018

http://europepmc.org/abstract/MED/16232659

5

1 reference

Europe PubMed Central

8 February 2018

http://europepmc.org/abstract/MED/16232659

Molecular detection, isolation, and physiological characterization of functionally dominant phenol-degrading bacteria in activated sludge

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Population dynamics of phenol-degrading bacteria in activated sludge determined by gyrB-targeted quantitative PCR.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

A novel means to develop strain-specific DNA probes for detecting bacteria in the environment.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Development of PCR primer systems for amplification of nitrite reductase genes (nirK and nirS) to detect denitrifying bacteria in environmental samples

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Estimating biodegradative gene numbers at a JP-5 contaminated site using PCR.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

DNA recovery and PCR quantification of catechol 2,3-dioxygenase genes from different soil types

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Metabolic diversity of aromatic hydrocarbon-degrading bacteria from a petroleum-contaminated aquifer

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Computer programs for handling nucleic acid sequences

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

High and low annealing temperatures increase both specificity and yield in touchdown and stepdown PCR.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Conservation of regulatory and structural genes for a multi-component phenol hydroxylase within phenol-catabolizing bacteria that utilize a meta-cleavage pathway

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

DNA sequence of the Acinetobacter calcoaceticus catechol 1,2-dioxygenase I structural gene catA: evidence for evolutionary divergence of intradiol dioxygenases by acquisition of DNA sequence repetitions

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Cloning, DNA sequencing, and amino acid sequencing of catechol 1,2-dioxygenases (pyrocatechase) from Pseudomonas putida mt-2 and Pseudomonas arvilla C-1.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Identification and characterization of a new plasmid carrying genes for degradation of 2,4-dichlorophenoxyacetate from Pseudomonas cepacia CSV90.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Sequence of the plasmid-encoded catechol 1,2-dioxygenase-expressing gene, pheB, of phenol-degrading Pseudomonas sp. strain EST1001.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Genetic organization, nucleotide sequence and regulation of expression of genes encoding phenol hydroxylase and catechol 1,2-dioxygenase in Acinetobacter calcoaceticus NCIB8250.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Organization and sequence analysis of the 2,4-dichlorophenol hydroxylase and dichlorocatechol oxidative operons of plasmid pJP4

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Cloning and characterization of a gene coding for the catechol 1,2-dioxygenase of Arthrobacter sp. mA3.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

The aerobic pseudomonads: a taxonomic study

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Sequence analysis of the Pseudomonas sp. strain P51 tcb gene cluster, which encodes metabolism of chlorinated catechols: evidence for specialization of catechol 1,2-dioxygenases for chlorinated substrates

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Plasmid-encoded genes specifying aniline oxidation from Acinetobacter sp. strain YAA.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Cloning and sequencing of the catechol 2,3-dioxygenase gene of Alcaligenes sp. KF711.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Catechol 2,3-dioxygenases functional in oxygen-limited (hypoxic) environments.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Cloning and characterization of extradiol aromatic ring-cleavage dioxygenases of Pseudomonas aeruginosa JI104

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Analysis of cumene (isopropylbenzene) degradation genes from Pseudomonas fluorescens IP01

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

TOL plasmid pWW15 contains two nonhomologous, independently regulated catechol 2,3-oxygenase genes

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Nucleotide sequence and expression of gene nahH of plasmid NAH7 and homology with gene xylE of TOL pWWO.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

The lower pathway operon for benzoate catabolism in biphenyl-utilizing Pseudomonas sp. strain IC and the nucleotide sequence of the bphE gene for catechol 2,3-dioxygenase.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

The catechol 2,3-dioxygenase gene of Rhodococcus rhodochrous CTM: nucleotide sequence, comparison with isofunctional dioxygenases and evidence for an active-site histidine.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Molecular and biochemical characterization of two meta-cleavage dioxygenases involved in biphenyl and m-xylene degradation by Beijerinckia sp. strain B1.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Localization and organization of phenol degradation genes of Pseudomonas putida strain H.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Nucleotide sequence of xylE from the TOL pDK1 plasmid and structural comparison with isofunctional catechol-2,3-dioxygenase genes from TOL, pWW0 and NAH7

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Cloning of salicylate hydroxylase gene and catechol 2,3-dioxygenase gene and sequencing of an intergenic sequence between the two genes of Pseudomonas putida KF715.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Cloning and sequences of the first eight genes of the chromosomally encoded (methyl) phenol degradation pathway from Pseudomonas putida P35X.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Cloning of cmpE, a plasmid-borne catechol 2,3-dioxygenase-encoding gene from the aromatic- and chloroaromatic-degrading Pseudomonas sp. HV3.

1 reference

https://api.crossref.org/works/10.1016%2FS1389-1723%2800%2987673-2

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

10.1016/S1389-1723(00)87673-2

1 reference

Europe PubMed Central

8 February 2018

http://europepmc.org/abstract/MED/16232659

1 reference

Europe PubMed Central

8 February 2018

http://europepmc.org/abstract/MED/16232659

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q48116617&oldid=1416760524"