(Q48145354)

English

Multiple independent losses of photosynthesis and differing evolutionary rates in the genus Cryptomonas (Cryptophyceae): combined phylogenetic analyses of DNA sequences of the nuclear and the nucleomorph ribosomal operons

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scholarly article

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Europe PubMed Central

PubMed publication ID

9 February 2018

http://europepmc.org/abstract/MED/15785847

Multiple independent losses of photosynthesis and differing evolutionary rates in the genus Cryptomonas (Cryptophyceae): combined phylogenetic analyses of DNA sequences of the nuclear and the nucleomorph ribosomal operons (English)

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Europe PubMed Central

PubMed publication ID

9 February 2018

http://europepmc.org/abstract/MED/15785847

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1 reference

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Kerstin Hoef-Emden

1

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Europe PubMed Central

PubMed publication ID

9 February 2018

http://europepmc.org/abstract/MED/15785847

publication date

1 February 2005

1 reference

Europe PubMed Central

PubMed publication ID

9 February 2018

http://europepmc.org/abstract/MED/15785847

Journal of Molecular Evolution

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Europe PubMed Central

PubMed publication ID

9 February 2018

http://europepmc.org/abstract/MED/15785847

60

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Europe PubMed Central

PubMed publication ID

9 February 2018

http://europepmc.org/abstract/MED/15785847

2

1 reference

Europe PubMed Central

PubMed publication ID

9 February 2018

http://europepmc.org/abstract/MED/15785847

183-195

1 reference

Europe PubMed Central

PubMed publication ID

9 February 2018

http://europepmc.org/abstract/MED/15785847

https://scigraph.springernature.com/pub.10.1007/s00239-004-0089-5

0 references

THE RELATION OF RECOMBINATION TO MUTATIONAL ADVANCE

1 reference

https://api.crossref.org/works/10.1007%2FS00239-004-0089-5

21 January 2018

Investigating deep phylogenetic relationships among cyanobacteria and plastids by small subunit rRNA sequence analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phylogeny of the Bangiophycidae (Rhodophyta) and the secondary endosymbiotic origin of algal plastids

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The nucleo morph genomes of cryptophytes and chlorarachniophytes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An Updated and Comprehensive rRNA Phylogeny of (Crown) Eukaryotes Based on Rate-Calibrated Evolutionary Distances

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complete gene map of the plastid genome of the nonphotosynthetic euglenoid flagellate Astasia longa.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The highly reduced genome of an enslaved algal nucleus

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Accelerated evolution of functional plastid rRNA and elongation factor genes due to reduced protein synthetic load after the loss of photosynthesis in the chlorophyte alga Polytoma.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complex patterns of plastid 16S rRNA gene evolution in nonphotosynthetic green algae

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CONSEL: for assessing the confidence of phylogenetic tree selection

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complete genomic sequence of the filamentous nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The analysis of 100 genes supports the grouping of three highly divergent amoebae: Dictyostelium, Entamoeba, and Mastigamoeba

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Base composition bias might result from competition for metabolic resources.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Progress with parasite plastids

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nuclear and nucleomorph SSU rDNA phylogeny in the Cryptophyta and the evolution of cryptophyte diversity

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Vestigial chloroplasts in heterotrophic stramenopiles Pteridomonas danica and Ciliophrys infusionum (Dictyochophyceae).

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A single origin of the peridinin- and fucoxanthin-containing plastids in dinoflagellates through tertiary endosymbiosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Lateral gene transfer and the evolution of plastid-targeted proteins in the secondary plastid-containing alga Bigelowiella natans

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phylogeny and taxonomic revision of plastid-containing euglenophytes based on SSU rDNA sequence comparisons and synapomorphic signatures in the SSU rRNA secondary structure

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mfold web server for nucleic acid folding and hybridization prediction

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MrBayes 3: Bayesian phylogenetic inference under mixed models

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Function and evolution of a minimal plastid genome from a nonphotosynthetic parasitic plant

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparison of plastid 16S rRNA (rrn16) genes from Helicosporidium spp.: evidence supporting the reclassification of Helicosporidia as green algae (Chlorophyta).

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Revision of the genus Cryptomonas (Cryptophyceae): a combination of molecular phylogeny and morphology provides insights into a long-hidden dimorphism

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Loss of photosynthetic and chlororespiratory genes from the plastid genome of a parasitic flowering plant

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phylogenetic Relationships among the Cryptophyta: Analyses of Nuclear-Encoded SSU rRNA Sequences Support the Monophyly of Extant Plastid-Containing Lineages

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cryptomonad biliproteins - an evolutionary perspective

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Occurrence of bacterivory in Cryptomonas, a common freshwater phytoplankter.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The small-subunit ribosomal RNA gene sequences from the hypotrichous ciliates Oxytricha nova and Stylonychia pustulata.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Leucoplast of the cryptomonad Chilomonas paramecium. Evidence for presence of a true plastid in a colorless flagellate

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chloroplast structure of the Cryptophyceae. Evidence for phycobiliproteins within intrathylakoidal spaces

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Ejectisomes of the FlagellateChilomonas paramecium: Visualization by Freeze-Fracture and Isolation Techniques1

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evolution of the phycobiliproteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High rates of nucleotide substitution in nuclear small-subunit (18S) rDNA from holoparasitic flowering plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence that an amoeba acquired a chloroplast by retaining part of an engulfed eukaryotic alga

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Maximum-likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complete sequence of Euglena gracilis chloroplast DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Accelerated evolution and Muller's rachet in endosymbiotic bacteria

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Maximum-Likelihood Models for Combined Analyses of Multiple Sequence Data

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complete gene map of the plastid-like DNA of the malaria parasite Plasmodium falciparum

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

TreeView: an application to display phylogenetic trees on personal computers

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evolution of plastid gene rps2 in a lineage of hemiparasitic and holoparasitic plants: many losses of photosynthesis and complex patterns of rate variation

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutation accumulation in nuclear, organelle, and prokaryotic transfer RNA genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rapid fixation of deleterious alleles can be caused by Muller's ratchet

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complete genome structure of the unicellular cyanobacterium Synechocystis sp. PCC6803.

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Deleterious mutation accumulation in organelle genomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MODELTEST: testing the model of DNA substitution

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The plastid genome of the cryptophyte alga, Guillardia theta: complete sequence and conserved synteny groups confirm its common ancestry with red algae

1 reference

https://pubmed.ncbi.nlm.nih.gov/15785847

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S00239-004-0089-5

1 reference

Europe PubMed Central

PubMed publication ID

9 February 2018

http://europepmc.org/abstract/MED/15785847

release_xshmx7svunayrmdx4of6qr336i

1 reference

https://api.fatcat.wiki/v0/release/xshmx7svunayrmdx4of6qr336i

24 November 2022

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PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

9 February 2018

http://europepmc.org/abstract/MED/15785847

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