(Q51181773)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23891614%20AND%20SRC:MED&resulttype=core&format=json

6 March 2020

title

The effect of regions flanking target site on siRNA potency (English)

1 reference

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6 March 2020

3

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6 March 2020

Yongchun Zuo

series ordinal

4

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23891614%20AND%20SRC:MED&resulttype=core&format=json

6 March 2020

author name string

Li Liu

series ordinal

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23891614%20AND%20SRC:MED&resulttype=core&format=json

6 March 2020

Qian-Zhong Li

series ordinal

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23891614%20AND%20SRC:MED&resulttype=core&format=json

6 March 2020

publication date

25 July 2013

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23891614%20AND%20SRC:MED&resulttype=core&format=json

6 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23891614%20AND%20SRC:MED&resulttype=core&format=json

6 March 2020

volume

102

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23891614%20AND%20SRC:MED&resulttype=core&format=json

6 March 2020

issue

4

1 reference

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6 March 2020

page(s)

215-222

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23891614%20AND%20SRC:MED&resulttype=core&format=json

Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans

6 March 2020

cites work

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Gene silencing in mammals by small interfering RNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

RNA interference is mediated by 21- and 22-nucleotide RNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Mechanisms of gene silencing by double-stranded RNA

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Dicers at RISC; the mechanism of RNAi

7 January 2021

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Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate

7 January 2021

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Rational siRNA design for RNA interference

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Guidelines for the selection of highly effective siRNA sequences for mammalian and chick RNA interference

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

An algorithm for selection of functional siRNA sequences.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

A library of siRNA duplexes targeting the phosphoinositide 3-kinase pathway: determinants of gene silencing for use in cell-based screens

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Sequence characteristics of functional siRNAs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Asymmetry in the assembly of the RNAi enzyme complex

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Functional siRNAs and miRNAs Exhibit Strand Bias

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

The gene-silencing efficiency of siRNA is strongly dependent on the local structure of mRNA at the targeted region

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Effect of target secondary structure on RNAi efficiency

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Efficient siRNA selection using hybridization thermodynamics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

The efficacy of small interfering RNAs targeted to the type 1 insulin-like growth factor receptor (IGF1R) is influenced by secondary structure in the IGF1R transcript

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

The activity of siRNA in mammalian cells is related to structural target accessibility: a comparison with antisense oligonucleotides

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Local RNA target structure influences siRNA efficacy: a systematic global analysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Local RNA target structure influences siRNA efficacy: systematic analysis of intentionally designed binding regions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

A systematic analysis of the effect of target RNA structure on RNA interference

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Incorporating structure to predict microRNA targets

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Potent effect of target structure on microRNA function.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

The role of site accessibility in microRNA target recognition

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

How microRNAs choose their targets

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

MicroRNA targeting specificity in mammals: determinants beyond seed pairing

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Sequence context outside the target region influences the effectiveness of miR-223 target sites in the RhoB 3'UTR

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Signatures of RNA binding proteins globally coupled to effective microRNA target sites

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Design of a genome-wide siRNA library using an artificial neural network

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Computational models with thermodynamic and composition features improve siRNA design

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

An accurate and interpretable model for siRNA efficacy prediction

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

More complete gene silencing by fewer siRNAs: transparent optimized design and biophysical signature

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Thermodynamic instability of siRNA duplex is a prerequisite for dependable prediction of siRNA activities

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Comparison of approaches for rational siRNA design leading to a new efficient and transparent method

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Improving model predictions for RNA interference activities that use support vector machine regression by combining and filtering features

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Selection of hyperfunctional siRNAs with improved potency and specificity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Approximate Bayesian feature selection on a large meta-dataset offers novel insights on factors that effect siRNA potency

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

siPRED: predicting siRNA efficacy using various characteristic methods

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

A structural interpretation of the effect of GC-content on efficiency of RNA interference

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Use of tetrapeptide signals for protein secondary-structure prediction.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

A review of feature selection techniques in bioinformatics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

DROP: an SVM domain linker predictor trained with optimal features selected by random forest.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

Identifying Important Risk Factors for Survival in Kidney Graft Failure Patients Using Random Survival Forests

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

7 January 2021

Support-vector networks

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

AU-rich elements and associated factors: are there unifying principles?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

mRNA turnover rate limits siRNA and microRNA efficacy

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2013.07.009

10.1016/J.YGENO.2013.07.009

7 January 2021

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23891614%20AND%20SRC:MED&resulttype=core&format=json

6 March 2020

1 reference