(Q51667422)

9 April 2018

https://api.crossref.org/works/10.1109/TCBB.2010.76

title

FEAST: Sensitive Local Alignment with Multiple Rates of Evolution (English)

1 reference

21 June 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20733242

21 June 2024

author name string

Alexander K. Hudek

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20733242

21 June 2024

Daniel G. Brown

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20733242

21 June 2024

language of work or name

English

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=20733242

21 June 2024

publication date

1 May 2011

1 reference

9 April 2018

full work available at URL

http://xplorestaging.ieee.org/ielx5/8857/5730188/05557850.pdf?arnumber=5557850

1 reference

https://api.crossref.org/works/10.1109/TCBB.2010.76

IEEE/ACM Transactions on Computational Biology and Bioinformatics

21 June 2024

published in

1 reference

9 April 2018

volume

8

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9 April 2018

issue

3

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9 April 2018

page(s)

698-709

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9 April 2018

Initial sequencing and analysis of the human genome

cites work

1 reference

28 May 2022

https://opencitations.net/index/coci/api/v1/citations/10.1038/35057062

Designing multiple simultaneous seeds for DNA similarity search.

https://api.crossref.org/works/10.1109/TCBB.2010.76

2

1 reference

Multiple spaced seeds for homology search

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

3

1 reference

Optimizing multiple spaced seeds for homology search.

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

4

1 reference

Parametric inference for biological sequence analysis

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

7

1 reference

Rapid and sensitive protein similarity searches

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

8

1 reference

Amino acid substitution matrices from protein blocks

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

9

1 reference

Multiple alignment by sequence annealing.

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

10

1 reference

A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

11

1 reference

Problems and solutions for estimating indel rates and length distributions

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

12

1 reference

Fast statistical alignment

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

13

1 reference

Conservation, regulation, synteny, and introns in a large-scale C. briggsae-C. elegans genomic alignment

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

14

1 reference

ProbCons: Probabilistic consistency-based multiple sequence alignment

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

15

1 reference

The whole alignment and nothing but the alignment: the problem of spurious alignment flanks.

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

16

1 reference

Dynamic programming alignment accuracy

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

17

1 reference

Enredo and Pecan: genome-wide mammalian consistency-based multiple alignment with paralogs

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

18

1 reference

Using multiple alignments to improve gene prediction

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

20

1 reference

Initial sequencing and comparative analysis of the mouse genome

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

24

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Statistical alignment with a sequence evolution model allowing rate heterogeneity along the sequence.

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

25

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

26

1 reference

Integrating genomic homology into gene structure prediction.

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

28

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PatternHunter: faster and more sensitive homology search

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

29

1 reference

Patternhunter II: highly sensitive and fast homology search

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

30

1 reference

Uncertainty in homology inferences: assessing and improving genomic sequence alignment

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

31

1 reference

MCALIGN2: faster, accurate global pairwise alignment of non-coding DNA sequences based on explicit models of indel evolution

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

32

1 reference

Human-mouse alignments with BLASTZ

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

33

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Identification of common molecular subsequences

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

34

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Aligning multiple genomic sequences with the threaded blockset aligner

21 June 2024

https://api.crossref.org/works/10.1109/TCBB.2010.76

38

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21 June 2024

Identifiers

DOI

10.1109/TCBB.2010.76

1 reference

9 April 2018

1 reference

9 April 2018