(Q51888019)

16 April 2018

title

RNA secondary structure analysis using the Vienna RNA package. (English)

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16 April 2018

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Ivo L Hofacker

1

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16 April 2018

publication date

1 February 2004

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16 April 2018

Current Protocols in Bioinformatics

published in

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16 April 2018

volume

Chapter 12

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page(s)

Unit 12.2

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RNA folding at elementary step resolution

cites work

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1202S04

Automatic detection of conserved base pairing patterns in RNA virus genomes

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Automatic detection of conserved RNA structure elements in complete RNA virus genomes

21 January 2018

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Secondary structure prediction for aligned RNA sequences

21 January 2018

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https://api.crossref.org/works/10.1002%2F0471250953.BI1202S04

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

21 January 2018

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https://api.crossref.org/works/10.1002%2F0471250953.BI1202S04

The equilibrium partition function and base pair binding probabilities for RNA secondary structure

21 January 2018

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https://api.crossref.org/works/10.1002%2F0471250953.BI1202S04

From sequences to shapes and back: a case study in RNA secondary structures.

21 January 2018

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https://api.crossref.org/works/10.1002%2F0471250953.BI1202S04

Coaxial stacking of helixes enhances binding of oligoribonucleotides and improves predictions of RNA folding

21 January 2018

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Complete suboptimal folding of RNA and the stability of secondary structures.

21 January 2018

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https://api.crossref.org/works/10.1002%2F0471250953.BI1202S04

On finding all suboptimal foldings of an RNA molecule

21 January 2018

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https://api.crossref.org/works/10.1002%2F0471250953.BI1202S04

Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1202S04

Vienna RNA secondary structure server

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1202S04

Fast folding and comparison of RNA secondary structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1202S04

Barrier Trees of Degenerate Landscapes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1202S04

10.1002/0471250953.BI1202S04

21 January 2018

Identifiers

DOI

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16 April 2018

PubMed ID

18428716

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16 April 2018