(Q51902683)

17 April 2018

title

Toward realistic modeling of dynamic processes in cell signaling: quantification of macromolecular crowding effects. (English)

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17 April 2018

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Jian Sun

1

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17 April 2018

Harel Weinstein

series ordinal

2

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17 April 2018

language of work or name

English

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publication date

1 October 2007

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17 April 2018

Journal of Chemical Physics

published in

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17 April 2018

volume

127

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17 April 2018

issue

15

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17 April 2018

page(s)

155105

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17 April 2018

How crowded is the cytoplasm?

cites work

1 reference

The effect of volume occupancy upon the thermodynamic activity of proteins: some biochemical consequences

21 January 2018

1 reference

Estimation of macromolecule concentrations and excluded volume effects for the cytoplasm of Escherichia coli

21 January 2018

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Macromolecular crowding: qualitative and semiquantitative successes, quantitative challenges.

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A voyage to the inner space of cells

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Atomic-level observation of macromolecular crowding effects: escape of a protein from the GroEL cage

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Molecular crowding enhances native state stability and refolding rates of globular proteins

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The influence of macromolecular crowding and macromolecular confinement on biochemical reactions in physiological media

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Macromolecular crowding: biochemical, biophysical, and physiological consequences

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Reaction kinetics in intracellular environments with macromolecular crowding: simulations and rate laws

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Implications of macromolecular crowding for signal transduction and metabolite channeling

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Crowding effects on EcoRV kinetics and binding

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Effect of crowding on protein-protein association rates: fundamental differences between low and high mass crowding agents

21 January 2018

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Generalized concentration dependence of globular protein self-diffusion coefficients in aqueous solutions.

21 January 2018

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Computational cell biology: spatiotemporal simulation of cellular events

21 January 2018

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Intracellular signaling: spatial and temporal control

21 January 2018

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Quantitative cell biology with the Virtual Cell

21 January 2018

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Evidence for ectopic neurotransmission at a neuronal synapse

21 January 2018

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Diffusion-controlled macromolecular interactions

21 January 2018

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Substrate concentration dependence of the diffusion-controlled steady-state rate constant

21 January 2018

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Simulated diffusion of phosphorylated CheY through the cytoplasm of Escherichia coli.

21 January 2018

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A molecular model for the dependence of the osmotic pressure of bovine serum albumin upon concentration and pH.

21 January 2018

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Mesoscopic model for diffusion-influenced reaction dynamics.

21 January 2018

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Finite concentration effects on diffusion-controlled reactions

21 January 2018

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Test of mean-field equations for two types of hard-sphere systems by a Brownian-dynamics simulation and a molecular-dynamics simulation.

21 January 2018

1 reference

Electrostatic steering and ionic tethering in enzyme-ligand binding: insights from simulations

21 January 2018

1 reference

Electrostatic influence on the kinetics of ligand binding to acetylcholinesterase. Distinctions between active center ligands and fasciculin

21 January 2018

1 reference

Determinants of the translational mobility of a small solute in cell cytoplasm

21 January 2018

1 reference

Effective interactions between electric double layers

21 January 2018

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Robustness in simple biochemical networks

21 January 2018

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Concerted simulations reveal how peroxidase compound III formation results in cellular oscillations

21 January 2018

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Diffusion of spheres in crowded suspensions of rods.

21 January 2018

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Cytoarchitecture and physical properties of cytoplasm: volume, viscosity, diffusion, intracellular surface area

21 January 2018

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Protein folding and binding in confined spaces and in crowded solutions

21 January 2018

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21 January 2018

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21 January 2018

Identifiers

DOI

10.1063/1.2789434

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17 April 2018

release_a3q2zwqx4fdcvfgbfrhdwu25g4

Fatcat ID

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Fatcat

https://api.fatcat.wiki/v0/release/a3q2zwqx4fdcvfgbfrhdwu25g4

mapped directly with Wikidata item

24 November 2022

based on heuristic

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17 April 2018