(Q51920179)

17 April 2018

title

Master equation approach to DNA breathing in heteropolymer DNA. (English)

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17 April 2018

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2

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17 April 2018

Ralf Metzler

series ordinal

4

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17 April 2018

author name string

Tobias Ambjörnsson

series ordinal

1

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17 April 2018

Michael A Lomholt

series ordinal

3

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17 April 2018

language of work or name

English

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publication date

16 February 2007

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17 April 2018

published in

Physical Review E

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17 April 2018

volume

75

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17 April 2018

issue

2 Pt 1

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17 April 2018

page(s)

021908

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17 April 2018

Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules

cites work

1 reference

https://api.crossref.org/works/10.1103%2FPHYSREVE.75.021908

Force-induced melting of the DNA double helix 1. Thermodynamic analysis

21 January 2018

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Force-induced melting of the DNA double helix. 2. Effect of solution conditions

21 January 2018

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https://api.crossref.org/works/10.1103%2FPHYSREVE.75.021908

Sequence-dependent base pair opening in DNA double helix

21 January 2018

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https://api.crossref.org/works/10.1103%2FPHYSREVE.75.021908

Statistical mechanical simulation of polymeric DNA melting with MELTSIM.

21 January 2018

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https://api.crossref.org/works/10.1103%2FPHYSREVE.75.021908

Reparametrizing the loop entropy weights: effect on DNA melting curves.

21 January 2018

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https://api.crossref.org/works/10.1103%2FPHYSREVE.75.021908

Stacked-unstacked equilibrium at the nick site of DNA

21 January 2018

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https://api.crossref.org/works/10.1103%2FPHYSREVE.75.021908

Bubble Dynamics in Double-Stranded DNA

21 January 2018

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https://api.crossref.org/works/10.1103%2FPHYSREVE.75.021908

DNA dynamically directs its own transcription initiation

21 January 2018

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https://api.crossref.org/works/10.1103%2FPHYSREVE.75.021908

Kinetic regulation of single DNA molecule denaturation by T4 gene 32 protein structural domains.

21 January 2018

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https://api.crossref.org/works/10.1103%2FPHYSREVE.75.021908

Mechanical measurement of single-molecule binding rates: kinetics of DNA helix-destabilization by T4 gene 32 protein

21 January 2018

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LAST motifs and SMART domains in gene 32 protein: an unfolding story of autoregulation?

21 January 2018

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https://api.crossref.org/works/10.1103%2FPHYSREVE.75.021908

Coupled dynamics of DNA breathing and of proteins that selectively bind to single-stranded DNA.

21 January 2018

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https://api.crossref.org/works/10.1103%2FPHYSREVE.75.021908

DNA bubble dynamics as a quantum Coulomb problem.

21 January 2018

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https://api.crossref.org/works/10.1103%2FPHYSREVE.75.021908

Sequence sensitivity of breathing dynamics in heteropolymer DNA.

21 January 2018

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https://api.crossref.org/works/10.1103%2FPHYSREVE.75.021908

Localization of denaturation bubbles in random DNA sequences

21 January 2018

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https://api.crossref.org/works/10.1103%2FPHYSREVE.75.021908

Theory of DNA melting curves

21 January 2018

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Poland–Scheraga Models and the DNA Denaturation Transition

21 January 2018

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Directed motion emerging from two coupled random processes: translocation of a chain through a membrane nanopore driven by binding proteins.

21 January 2018

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https://api.crossref.org/works/10.1103%2FPHYSREVE.75.021908

A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics

21 January 2018

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A general method for numerically simulating the stochastic time evolution of coupled chemical reactions

21 January 2018

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https://api.crossref.org/works/10.1103%2FPHYSREVE.75.021908

Exact stochastic simulation of coupled chemical reactions

21 January 2018

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https://api.crossref.org/works/10.1103%2FPHYSREVE.75.021908

Thermal denaturation of DNA molecules: A comparison of theory with experiment

21 January 2018

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A single mode of DNA base-pair opening drives imino proton exchange

21 January 2018

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10.1103/PHYSREVE.75.021908

21 January 2018

Identifiers

DOI

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17 April 2018

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17 April 2018