(Q52043306)

English

Hamming distance geometry of a protein conformational space: application to the clustering of a 4-ns molecular dynamics trajectory of the HIV-1 integrase catalytic core.

scientific article published in May 2002

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

20 April 2018

http://europepmc.org/abstract/MED/11933064

Hamming distance geometry of a protein conformational space: application to the clustering of a 4-ns molecular dynamics trajectory of the HIV-1 integrase catalytic core. (English)

1 reference

Europe PubMed Central

PubMed publication ID

20 April 2018

http://europepmc.org/abstract/MED/11933064

Hamming distance

1 reference

based on heuristic

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author name string

Cyril Laboulais

1

1 reference

Europe PubMed Central

PubMed publication ID

20 April 2018

http://europepmc.org/abstract/MED/11933064

Mohammed Ouali

2

1 reference

Europe PubMed Central

PubMed publication ID

20 April 2018

http://europepmc.org/abstract/MED/11933064

Marc Le Bret

3

1 reference

Europe PubMed Central

PubMed publication ID

20 April 2018

http://europepmc.org/abstract/MED/11933064

Jacques Gabarro-Arpa

4

1 reference

Europe PubMed Central

PubMed publication ID

20 April 2018

http://europepmc.org/abstract/MED/11933064

language of work or name

0 references

publication date

1 May 2002

1 reference

Europe PubMed Central

PubMed publication ID

20 April 2018

http://europepmc.org/abstract/MED/11933064

1 reference

Europe PubMed Central

PubMed publication ID

20 April 2018

http://europepmc.org/abstract/MED/11933064

47

1 reference

Europe PubMed Central

PubMed publication ID

20 April 2018

http://europepmc.org/abstract/MED/11933064

2

1 reference

Europe PubMed Central

PubMed publication ID

20 April 2018

http://europepmc.org/abstract/MED/11933064

169-179

1 reference

Europe PubMed Central

PubMed publication ID

20 April 2018

http://europepmc.org/abstract/MED/11933064

Structural basis of hierarchical multiple substates of a protein. I: Introduction.

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10081

21 January 2018

The Energy Landscapes and Motions of Proteins

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10081

21 January 2018

Statistical clustering techniques for the analysis of long molecular dynamics trajectories: analysis of 2.2-ns trajectories of YPGDV.

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10081

21 January 2018

Protein conformational landscapes: energy minimization and clustering of a long molecular dynamics trajectory

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10081

21 January 2018

Crystal structures of the catalytic domain of HIV-1 integrase free and complexed with its metal cofactor: high level of similarity of the active site with other viral integrases

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10081

21 January 2018

A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10081

21 January 2018

Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10081

21 January 2018

Hydration of the dTn.dAn x dTn parallel triple helix: a Fourier transform infrared and gravimetric study correlated with molecular dynamics simulations

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10081

21 January 2018

Theory of protein folding: the energy landscape perspective

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10081

21 January 2018

A discussion of the solution for the best rotation to relate two sets of vectors

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10081

21 January 2018

Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10081

21 January 2018

Clustering of a molecular dynamics trajectory with a Hamming distance

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10081

21 January 2018

Comparison of two highly refined structures of bovine pancreatic trypsin inhibitor

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10081

21 January 2018

Protein flexibility in solution and in crystals

1 reference

https://api.crossref.org/works/10.1002%2FPROT.10081

21 January 2018

Identifiers

10.1002/PROT.10081

1 reference

Europe PubMed Central

PubMed publication ID

20 April 2018

http://europepmc.org/abstract/MED/11933064

physics/0110067

1 reference

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

20 April 2018

http://europepmc.org/abstract/MED/11933064

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