(Q54312566)

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Comparative genomics of methylated amine utilization by marine Roseobacter clade bacteria and development of functional gene markers (tmm, gmaS).

scientific article published on 28 April 2012

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scholarly article

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22540311%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

Comparative genomics of methylated amine utilization by marine Roseobacter clade bacteria and development of functional gene markers (tmm, gmaS) (English)

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22540311%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

comparative genomics

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based on heuristic

inferred from title

1

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22540311%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

author name string

Yin Chen

1

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Europe PubMed Central

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27 May 2018

http://europepmc.org/abstract/MED/22540311

publication date

28 April 2012

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22540311%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

Environmental Microbiology

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22540311%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

14

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22540311%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

9

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22540311%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

2308-2322

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22540311%20AND%20SRC:MED&resulttype=core&format=json

30 January 2020

Roseovarius mucosus sp. nov., a member of the Roseobacter clade with trace amounts of bacteriochlorophyll a.

1 reference

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21 January 2018

Occurrence and expression of gene transfer agent genes in marine bacterioplankton

1 reference

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21 January 2018

Roseovarius crassostreae sp. nov., a member of the Roseobacter clade and the apparent cause of juvenile oyster disease (JOD) in cultured Eastern oysters

1 reference

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21 January 2018

Comprehensive proteomics of Methylobacterium extorquens AM1 metabolism under single carbon and nonmethylotrophic conditions

1 reference

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Overview of the marine roseobacter lineage

1 reference

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Identification of active methanotrophs in a landfill cover soil through detection of expression of 16S rRNA and functional genes.

1 reference

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Life without light: microbial diversity and evidence of sulfur- and ammonium-based chemolithotrophy in Movile Cave

1 reference

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Monomethylamine as a nitrogen source for a nonmethylotrophic bacterium, Agrobacterium tumefaciens

1 reference

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{gamma}-Glutamylmethylamide is an essential intermediate in the metabolism of methylamine by Methylocella silvestris

1 reference

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Bacterial flavin-containing monooxygenase is trimethylamine monooxygenase

1 reference

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Modularity of methylotrophy, revisited

1 reference

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The expanding world of methylotrophic metabolism

1 reference

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Catabolism of dimethylsulphoniopropionate: microorganisms, enzymes and genes

1 reference

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Electron transfer flavoprotein from Methylophilus methylotrophus: properties, comparison with other electron transfer flavoproteins, and regulation of expression by carbon source

1 reference

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21 January 2018

Microbial methanol uptake in northeast Atlantic waters

1 reference

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21 January 2018

The small genome of an abundant coastal ocean methylotroph

1 reference

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A glutathione-dependent formaldehyde-activating enzyme (Gfa) from Paracoccus denitrificans detected and purified via two-dimensional proton exchange NMR spectroscopy

1 reference

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21 January 2018

Methylosulfonomonas methylovora gen. nov., sp. nov., and Marinosulfonomonas methylotropha gen. nov., sp. nov.: novel methylotrophs able to grow on methanesulfonic acid

1 reference

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21 January 2018

Methylophaga marina gen. nov., sp. nov. and Methylophaga thalassica sp. nov., Marine Methylotrophs

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2012.02765.X

21 January 2018

Development and use of fluorescent 16S rRNA-targeted probes for the specific detection of Methylophaga species by in situ hybridization in marine sediments

1 reference

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21 January 2018

Identity of the subunits and the stoicheiometry of prosthetic groups in trimethylamine dehydrogenase and dimethylamine dehydrogenase

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2012.02765.X

21 January 2018

Methylophaga aminisulfidivorans sp. nov., a restricted facultatively methylotrophic marine bacterium

1 reference

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21 January 2018

Genetics of the glutamate-mediated methylamine utilization pathway in the facultative methylotrophic beta-proteobacterium Methyloversatilis universalis FAM5.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2012.02765.X

21 January 2018

ARB: a software environment for sequence data

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2012.02765.X

21 January 2018

The integrated microbial genomes system: an expanding comparative analysis resource

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2012.02765.X

21 January 2018

Purification of the formate-tetrahydrofolate ligase from Methylobacterium extorquens AM1 and demonstration of its requirement for methylotrophic growth.

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2012.02765.X

21 January 2018

Identification of active methylotrophic bacteria inhabiting surface sediment of a marine estuary

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2012.02765.X

21 January 2018

Stable-isotope probing implicates Methylophaga spp and novel Gammaproteobacteria in marine methanol and methylamine metabolism

1 reference

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21 January 2018

Substrate-specific clades of active marine methylotrophs associated with a phytoplankton bloom in a temperate coastal environment

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2012.02765.X

21 January 2018

Genome characteristics of a generalist marine bacterial lineage

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2012.02765.X

21 January 2018

Formation and breakdown of glycine betaine and trimethylamine in hypersaline environments

1 reference

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Nitrogen assimilation and global regulation in Escherichia coli.

1 reference

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The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

1 reference

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21 January 2018

Isolation of Methylophaga spp. from marine dimethylsulfide-degrading enrichment cultures and identification of polypeptides induced during growth on dimethylsulfide

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2012.02765.X

21 January 2018

A newly discovered Roseobacter cluster in temperate and polar oceans

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2012.02765.X

21 January 2018

Emerging patterns of marine nitrogen fixation

1 reference

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Citreicella thiooxidans gen. nov., sp. nov., a novel lithoheterotrophic sulfur-oxidizing bacterium from the Black Sea

1 reference

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21 January 2018

Chloromethane-induced genes define a third C1 utilization pathway in Methylobacterium chloromethanicum CM4.

1 reference

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21 January 2018

Leisingera nanhaiensis sp. nov., isolated from marine sediment

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2012.02765.X

21 January 2018

One carbon metabolism in SAR11 pelagic marine bacteria

1 reference

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MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

1 reference

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21 January 2018

1 reference

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21 January 2018

Leisingera aquimarina sp. nov., isolated from a marine electroactive biofilm, and emended descriptions of Leisingera methylohalidivorans Schaefer et al. 2002, Phaeobacter daeponensis Yoon et al. 2007 and Phaeobacter inhibens Martens et al. 2006.

1 reference

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21 January 2018

Novel formaldehyde-activating enzyme in Methylobacterium extorquens AM1 required for growth on methanol

1 reference

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21 January 2018

Environmental biology of the marine Roseobacter lineage

1 reference

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21 January 2018

Mutagenesis of the C1 oxidation pathway in Methanosarcina barkeri: new insights into the Mtr/Mer bypass pathway.

1 reference

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21 January 2018

Identification of proteins involved in formaldehyde metabolism by Rhodobacter sphaeroides

1 reference

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The primary structure of Hyphomicrobium X dimethylamine dehydrogenase. Relationship to trimethylamine dehydrogenase and implications for substrate recognition.

1 reference

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Oceanicola pacificus sp. nov., isolated from a deep-sea pyrene-degrading consortium

1 reference

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Nitrogen cycle of the open ocean: from genes to ecosystems.

1 reference

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Leisingera methylohalidivorans gen. nov., sp. nov., a marine methylotroph that grows on methyl bromide

1 reference

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Evidence for the presence of a CmuA methyltransferase pathway in novel marine methyl halide-oxidizing bacteria

1 reference

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