(Q54369433)

28 May 2018

title

Regulatory exaptation of the catabolite repression protein (Crp)-cAMP system in Pseudomonas putida. (English)

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28 May 2018

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5

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author name string

Paola Milanesio

1

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28 May 2018

Alejandro Arce-Rodríguez

2

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28 May 2018

Amalia Muñoz

3

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28 May 2018

Belén Calles

4

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28 May 2018

publication date

8 September 2010

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28 May 2018

Environmental Microbiology

published in

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28 May 2018

volume

13

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issue

2

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28 May 2018

page(s)

324-339

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28 May 2018

Vfr controls quorum sensing in Pseudomonas aeruginosa

cites work

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Growth of Escherichia coli MG1655 on LB medium: monitoring utilization of sugars, alcohols, and organic acids with transcriptional microarrays.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Interplay of cellular cAMP levels, {sigma}S activity and oxidative stress resistance in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

New technologies to assess genotype-phenotype relationships

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Phenotype microarrays for high-throughput phenotypic testing and assay of gene function

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Transcription activation by catabolite activator protein (CAP)

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

The IIANtr (PtsN) protein of Pseudomonas putida mediates the C source inhibition of the sigma54-dependent Pu promoter of the TOL plasmid

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Convergent peripheral pathways catalyze initial glucose catabolism in Pseudomonas putida: genomic and flux analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Global regulation of food supply by Pseudomonas putida DOT-T1E

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

How phosphotransferase system-related protein phosphorylation regulates carbohydrate metabolism in bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Insights into the genomic basis of niche specificity of Pseudomonas putida KT2440.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Activation of the transcriptional regulator XylR of Pseudomonas putida by release of repression between functional domains.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

In vitro and in vivo characterization of the Pseudomonas aeruginosa cyclic AMP (cAMP) phosphodiesterase CpdA, required for cAMP homeostasis and virulence factor regulation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

The Pseudomonas aeruginosa Vfr regulator controls global virulence factor expression through cyclic AMP-dependent and -independent mechanisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Transcriptome analysis of Crp-dependent catabolite control of gene expression in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Studies of the distribution of Escherichia coli cAMP-receptor protein and RNA polymerase along the E. coli chromosome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Differentiation and distribution of colistin- and sodium dodecyl sulfate-tolerant cells in Pseudomonas aeruginosa biofilms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Regulatory sequence analysis tools

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in gram-negative bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Evolvability and hierarchy in rewired bacterial gene networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Characterization of DNA-binding specificity and analysis of binding sites of the Pseudomonas aeruginosa global regulator, Vfr, a homologue of the Escherichia coli cAMP receptor protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

A wide-host-range suicide vector for improving reverse genetics in Gram-negative bacteria: inactivation of the blaA gene of Yersinia enterocolitica

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

A general system to integrate lacZ fusions into the chromosomes of gram-negative eubacteria: regulation of the Pm promoter of the TOL plasmid studied with all controlling elements in monocopy.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

The SWISS-MODEL Repository and associated resources

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Transcriptional regulation by cAMP and its receptor protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Trends between gene content and genome size in prokaryotic species with larger genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Phylogeny of the bacterial superfamily of Crp-Fnr transcription regulators: exploiting the metabolic spectrum by controlling alternative gene programs

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Myriads of protein families, and still counting

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Clustal W and Clustal X version 2.0

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

cGMP production in bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Regulatory noise in prokaryotic promoters: how bacteria learn to respond to novel environmental signals

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Analysis and construction of stable phenotypes in gram-negative bacteria with Tn5- and Tn10-derived minitransposons

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

The multi-talented bacterial adenylate cyclases

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Identifying global regulators in transcriptional regulatory networks in bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Functional genomics of Escherichia coli in Japan

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Cyclic AMP-dependent catabolite repression is the dominant control mechanism of metabolic fluxes under glucose limitation in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Transcription activation at class II CAP-dependent promoters: two interactions between CAP and RNA polymerase

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

In vitro reconstitution of catabolite repression in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Structure of the CAP-DNA complex at 2.5 angstroms resolution: a complete picture of the protein-DNA interface

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

VTR expression cassettes for engineering conditional phenotypes in Pseudomonas: activity of the Pu promoter of the TOL plasmid under limiting concentrations of the XylR activator protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Markerless gene replacement in Escherichia coli stimulated by a double-strand break in the chromosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Pedigree and taxonomic credentials of Pseudomonas putida strain KT2440.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

cAMP signaling in Dictyostelium. Complexity of cAMP synthesis, degradation and detection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Mining logic gates in prokaryotic transcriptional regulation networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

An adenylate cyclase-controlled signaling network regulates Pseudomonas aeruginosa virulence in a mouse model of acute pneumonia

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Plasmids with easily excisable xylE cassettes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Modular organization in the reductive evolution of protein-protein interaction networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

RSAT: regulatory sequence analysis tools

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Genetic evidence that catabolites of the Entner-Doudoroff pathway signal C source repression of the sigma54 Pu promoter of Pseudomonas putida

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Global features of the Pseudomonas putida KT2440 genome sequence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

The vfr gene product, required for Pseudomonas aeruginosa exotoxin A and protease production, belongs to the cyclic AMP receptor protein family

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Two-state allosteric modeling suggests protein equilibrium as an integral component for cyclic AMP (cAMP) specificity in the cAMP receptor protein of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Growth phase-dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome-wide DNA microarray.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Mechanism of activation of catabolite-sensitive genes: a positive control system

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Exaptation—a Missing Term in the Science of Form

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

Analysis of Pseudomonas gene products using lacIq/Ptrp-lac plasmids and transposons that confer conditional phenotypes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2010.02331.X

10.1111/J.1462-2920.2010.02331.X

21 January 2018

Identifiers

DOI

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28 May 2018

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28 May 2018