(Q54453637)

30 May 2018

title

The exceptionally tight affinity of DnaA for ATP/ADP requires a unique aspartic acid residue in the AAA+ sensor 1 motif. (English)

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30 May 2018

author name string

Hironori Kawakami

1

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30 May 2018

Shogo Ozaki

2

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30 May 2018

Shigeo Suzuki

3

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30 May 2018

Kenta Nakamura

4

1 reference

30 May 2018

Takayuki Senriuchi

5

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30 May 2018

Masayuki Su'etsugu

6

1 reference

30 May 2018

Kazuyuki Fujimitsu

7

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30 May 2018

Tsutomu Katayama

8

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30 May 2018

language of work or name

English

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publication date

17 October 2006

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30 May 2018

published in

Molecular Microbiology

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30 May 2018

volume

62

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30 May 2018

page(s)

1310-1324

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30 May 2018

issue

5

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30 May 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

cites work

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Overproduction of DnaA protein stimulates initiation of chromosome and minichromosome replication in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Structural analysis of a eukaryotic sliding DNA clamp-clamp loader complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Escherichia coli DnaA protein loads a single DnaB helicase at a DnaA box hairpin.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

The DnaC helicase loader is a dual ATP/ADP switch protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

The structure of bacterial DnaA: implications for general mechanisms underlying DNA replication initiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

An essential tryptophan of Escherichia coli DnaA protein functions in oligomerization at the E. coli replication origin

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Structural basis of replication origin recognition by the DnaA protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

VAT, the thermoplasma homolog of mammalian p97/VCP, is an N domain-regulated protein unfoldase

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

A novel regulatory mechanism couples deoxyribonucleotide synthesis and DNA replication in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

AAA+ proteins: have engine, will work

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Cooperative kinetics of both Hsp104 ATPase domains and interdomain communication revealed by AAA sensor-1 mutants

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Fate of DNA replication fork encountering a single DNA lesion during oriC plasmid DNA replication in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Inhibitory effects of basic or neutral phospholipid on acidic phospholipid-mediated dissociation of adenine nucleotide bound to DnaA protein, the initiator of chromosomal DNA replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

DiaA, a novel DnaA-binding protein, ensures the timely initiation of Escherichia coli chromosome replication.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Evolutionary history and higher order classification of AAA+ ATPases

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Ordered ATP hydrolysis in the gamma complex clamp loader AAA+ machine.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

CELLULAR DNA REPLICASES: Components and Dynamics at the Replication Fork

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Dissecting the role of a conserved motif (the second region of homology) in the AAA family of ATPases. Site-directed mutagenesis of the ATP-dependent protease FtsH.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

The initiator function of DnaA protein is negatively regulated by the sliding clamp of the E. coli chromosomal replicase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Hda, a novel DnaA-related protein, regulates the replication cycle in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Formation of an ATP-DnaA-specific initiation complex requires DnaA Arginine 285, a conserved motif in the AAA+ protein family.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Functional domains of Escherichia coli single-stranded DNA binding protein as assessed by analyses of the deletion mutants.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Coordinate binding of ATP and origin DNA regulates the ATPase activity of the origin recognition complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Interaction of the sliding clamp beta-subunit and Hda, a DnaA-related protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Two discriminatory binding sites in the Escherichia coli replication origin are required for DNA strand opening by initiator DnaA-ATP.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Chromosomal replicases as asymmetric dimers: studies of subunit arrangement and functional consequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Requirement for ATP by the DNA damage checkpoint clamp loader

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

The bacterial replication initiator DnaA. DnaA and oriC, the bacterial mode to initiate DNA replication

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Control of segregation of chromosomal DNA by sex factor F in Escherichia coli. Mutants of DNA gyrase subunit A suppress letD (ccdB) product growth inhibition

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Titration of the Escherichia coli DnaA protein to excess datA sites causes destabilization of replication forks, delayed replication initiation and delayed cell division.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

A nucleotide switch in the Escherichia coli DnaA protein initiates chromosomal replication: evidnece from a mutant DnaA protein defective in regulatory ATP hydrolysis in vitro and in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Determination of the secondary structure in solution of the Escherichia coli DnaA DNA-binding domain.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

AAA+ superfamily ATPases: common structure--diverse function

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

The DnaA homolog of the hyperthermophilic eubacterium Thermotoga maritima forms an open complex with a minimal 149-bp origin region in an ATP-dependent manner

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Mutational analysis of conserved sequence motifs in the budding yeast Cdc6 protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

The interaction domains of the DnaA and DnaB replication proteins of Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

ATP activates dnaA protein in initiating replication of plasmids bearing the origin of the E. coli chromosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Distinct roles for ATP binding and hydrolysis at individual subunits of an archaeal clamp loader

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Hyperinitiation of DNA replication in Escherichia coli leads to replication fork collapse and inviability

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Mechanism of origin unwinding: sequential binding of DnaA to double- and single-stranded DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

ATP- and ADP-dnaA protein, a molecular switch in gene regulation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

ATPase-dependent cooperative binding of ORC and Cdc6 to origin DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

DNA replication-coupled inactivation of DnaA protein in vitro: a role for DnaA arginine-334 of the AAA+ Box VIII motif in ATP hydrolysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Molecular mechanism of DNA replication-coupled inactivation of the initiator protein in Escherichia coli: interaction of DnaA with the sliding clamp-loaded DNA and the sliding clamp-Hda complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

Protein associations in DnaA-ATP hydrolysis mediated by the Hda-replicase clamp complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1365-2958.2006.05450.X

10.1111/J.1365-2958.2006.05450.X

21 January 2018

Identifiers

DOI

1 reference

30 May 2018

PubMed ID

17042785

1 reference

30 May 2018