(Q54462727)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16793378%20AND%20SRC:MED&resulttype=core&format=json

25 December 2019

title

Characterization of Escherichia coli translesion synthesis polymerases and their accessory factors (English)

1 reference

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25 December 2019

1 reference

4

1 reference

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25 December 2019

Graham C. Walker

5

1 reference

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25 December 2019

author name string

Penny J Beuning

1

1 reference

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25 December 2019

Sharotka M Simon

2

1 reference

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25 December 2019

Veronica G Godoy

3

1 reference

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25 December 2019

language of work or name

English

0 references

publication date

1 January 2006

1 reference

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25 December 2019

published in

Methods in Enzymology

1 reference

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25 December 2019

volume

408

1 reference

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25 December 2019

page(s)

318-340

1 reference

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Dominant negative umuD mutations decreasing RecA-mediated cleavage suggest roles for intact UmuD in modulation of SOS mutagenesis

25 December 2019

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Two processivity clamp interactions differentially alter the dual activities of UmuC.

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Structural basis for recruitment of translesion DNA polymerase Pol IV/DinB to the -clamp

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A set of lacZ mutations in Escherichia coli that allow rapid detection of each of the six base substitutions

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Proteins required for ultraviolet light and chemical mutagenesis. Identification of the products of the umuC locus of Escherichia coli

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Dimerization of the UmuD' protein in solution and its implications for regulation of SOS mutagenesis

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Converting a DNA damage checkpoint effector (UmuD2C) into a lesion bypass polymerase (UmuD'2C)

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Trading places: how do DNA polymerases switch during translesion DNA synthesis?

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Properties and functions of Escherichia coli: Pol IV and Pol V.

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The biochemical requirements of DNA polymerase V-mediated translesion synthesis revisited

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Reactivity of the tyrosyl radical of Escherichia coli ribonucleotide reductase -- control by the protein

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Error-prone repair DNA polymerases in prokaryotes and eukaryotes

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Analysis of the region between amino acids 30 and 42 of intact UmuD by a monocysteine approach

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A single amino acid governs enhanced activity of DinB DNA polymerases on damaged templates.

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Mapping and sequencing of mutations in the Escherichia colirpoB gene that lead to rifampicin resistance

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Specific in vivo protein-protein interactions between Escherichia coli SOS mutagenesis proteins

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Multiple pathways for SOS-induced mutagenesis in Escherichia coli: an overexpression of dinB/dinP results in strongly enhancing mutagenesis in the absence of any exogenous treatment to damage DNA

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Roles of chromosomal and episomal dinB genes encoding DNA pol IV in targeted and untargeted mutagenesis in Escherichia coli.

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Dynamics of substrate denaturation and translocation by the ClpXP degradation machine

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7 January 2021

Structural analysis of the umu operon required for inducible mutagenesis in Escherichia coli

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7 January 2021

Fidelity of Escherichia coli DNA polymerase IV. Preferential generation of small deletion mutations by dNTP-stabilized misalignment

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7 January 2021

Characterization of the umu-complementing operon from R391.

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Inhibition of RecA-mediated cleavage in covalent dimers of UmuD.

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A monocysteine approach for probing the structure and interactions of the UmuD protein

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The processing of a Benzo(a)pyrene adduct into a frameshift or a base substitution mutation requires a different set of genes in Escherichia coli

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7 January 2021

Autodigestion of lexA and phage lambda repressors

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7 January 2021

Analysis of translesion replication across an abasic site by DNA polymerase IV of Escherichia coli

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7 January 2021

New mutations in cloned Escherichia coli umuDC genes: novel phenotypes of strains carrying a umuC125 plasmid

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7 January 2021

Regulation of UmuD cleavage: role of the amino-terminal tail

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7 January 2021

The dinB operon and spontaneous mutation in Escherichia coli

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7 January 2021

Structural and biochemical characterization of the Escherichia coli argE gene product

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7 January 2021

Evidence for non-enzymatic glycosylation of Escherichia coli chromosomal DNA.

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A role for the umuDC gene products of Escherichia coli in increasing resistance to DNA damage in stationary phase by inhibiting the transition to exponential growth

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7 January 2021

Analysis of Escherichia coli RecA interactions with LexA, lambda CI, and UmuD by site-directed mutagenesis of recA.

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The genetic requirements for UmuDC-mediated cold sensitivity are distinct from those for SOS mutagenesis

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7 January 2021

The mutagenesis proteins UmuD' and UmuC prevent lethal frameshifts while increasing base substitution mutations

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7 January 2021

The mutagenesis protein UmuC is a DNA polymerase activated by UmuD', RecA, and SSB and is specialized for translesion replication

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7 January 2021

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7 January 2021

Induction of only one SOS operon, umuDC, is required for SOS mutagenesis in Escherichia coli.

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7 January 2021

Harnessing free radicals: formation and function of the tyrosyl radical in ribonucleotide reductase

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7 January 2021

umuDC-mediated cold sensitivity is a manifestation of functions of the UmuD(2)C complex involved in a DNA damage checkpoint control

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7 January 2021

The Escherichia coli SOS mutagenesis proteins UmuD and UmuD' interact physically with the replicative DNA polymerase

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7 January 2021

Genetic and biochemical characterization of a novel umuD mutation: insights into a mechanism for UmuD self-cleavage

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7 January 2021

Posttranslational modification of the umuD-encoded subunit of Escherichia coli DNA polymerase V regulates its interactions with the beta processivity clamp

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7 January 2021

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7 January 2021

Genetic interactions between the Escherichia coli umuDC gene products and the beta processivity clamp of the replicative DNA polymerase.

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7 January 2021

umuDC-dnaQ Interaction and its implications for cell cycle regulation and SOS mutagenesis in Escherichia coli.

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UmuD'(2)C is an error-prone DNA polymerase, Escherichia coli pol V.

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7 January 2021

Roles of E. coli DNA polymerases IV and V in lesion-targeted and untargeted SOS mutagenesis

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7 January 2021

Biochemical basis of SOS-induced mutagenesis in Escherichia coli: reconstitution of in vitro lesion bypass dependent on the UmuD'2C mutagenic complex and RecA protein.

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7 January 2021

The beta clamp targets DNA polymerase IV to DNA and strongly increases its processivity

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7 January 2021

The dinB gene encodes a novel E. coli DNA polymerase, DNA pol IV, involved in mutagenesis

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Polymerases leave fingerprints: analysis of the mutational spectrum in Escherichia coli rpoB to assess the role of polymerase IV in spontaneous mutation

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7 January 2021

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7 January 2021

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7 January 2021

UmuC mutagenesis protein of Escherichia coli: purification and interaction with UmuD and UmuD'.

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7 January 2021

A role for DNA polymerase V in G --> T mutations from the major benzo[a]pyrene N2-dG adduct when studied in a 5'-TGT sequence in E. coli

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7 January 2021

Cold sensitivity induced by overproduction of UmuDC in Escherichia coli

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7 January 2021