(Q54878172)

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Genome-Wide Fitness and Genetic Interactions Determined by Tn-seq, a High-Throughput Massively Parallel Sequencing Method for Microorganisms.

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

10 June 2018

http://europepmc.org/abstract/PMC/4696536

Genome-Wide Fitness and Genetic Interactions Determined by Tn-seq, a High-Throughput Massively Parallel Sequencing Method for Microorganisms. (English)

1 reference

Europe PubMed Central

PMC publication ID

10 June 2018

http://europepmc.org/abstract/PMC/4696536

Tim van Opijnen

1

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25641100%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

author name string

David W Lazinski

2

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25641100%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

Andrew Camilli

3

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25641100%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

publication date

2 February 2015

1 reference

Europe PubMed Central

PMC publication ID

10 June 2018

http://europepmc.org/abstract/PMC/4696536

Current Protocols in Microbiology

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25641100%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

36

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25641100%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

1E.3.1-1E.3.24

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25641100%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

Gene fitness landscapes of Vibrio cholerae at important stages of its life cycle

1 reference

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10 June 2018

Transposon insertion sequencing: a new tool for systems-level analysis of microorganisms.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4696536

10 June 2018

Homopolymer tail-mediated ligation PCR: a streamlined and highly efficient method for DNA cloning and library construction

1 reference

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Identification of essential genes of the periodontal pathogen Porphyromonas gingivalis

1 reference

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A fine scale phenotype-genotype virulence map of a bacterial pathogen

1 reference

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10 June 2018

Control of virulence by small RNAs in Streptococcus pneumoniae

1 reference

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10 June 2018

Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants

1 reference

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10 June 2018

Tracking insertion mutants within libraries by deep sequencing and a genome-wide screen for Haemophilus genes required in the lung

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4696536

10 June 2018

Tn-seq: high-throughput parallel sequencing for fitness and genetic interaction studies in microorganisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4696536

10 June 2018

Identifying genetic determinants needed to establish a human gut symbiont in its habitat

1 reference

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Maximal extraction of biological information from genetic interaction data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4696536

10 June 2018

Functional organization of the S. cerevisiae phosphorylation network

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4696536

10 June 2018

A genetic interaction map of RNA-processing factors reveals links between Sem1/Dss1-containing complexes and mRNA export and splicing

1 reference

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10 June 2018

Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast.

1 reference

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Generating a collection of insertion mutations in the Staphylococcus aureus genome using bursa aurealis

1 reference

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A comprehensive genetic characterization of bacterial motility

1 reference

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10 June 2018

Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map

1 reference

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Serotype competence and penicillin resistance in Streptococcus pneumoniae

1 reference

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Systematic pathway analysis using high-resolution fitness profiling of combinatorial gene deletions

1 reference

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10 June 2018

Characterization of mycobacterial virulence genes through genetic interaction mapping

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4696536

10 June 2018

A strategy for extracting and analyzing large-scale quantitative epistatic interaction data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4696536

10 June 2018

A global view of pleiotropy and phenotypically derived gene function in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4696536

10 June 2018

A DNA integrity network in the yeast Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4696536

10 June 2018

Exploration of the function and organization of the yeast early secretory pathway through an epistatic miniarray profile

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4696536

10 June 2018

Derivation of genetic interaction networks from quantitative phenotype data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4696536

10 June 2018

Biological robustness

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4696536

10 June 2018

Genome-wide mRNA surveillance is coupled to mRNA export

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4696536

10 June 2018

Global mapping of the yeast genetic interaction network

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4696536

10 June 2018

Chemogenomic profiling: identifying the functional interactions of small molecules in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4696536

10 June 2018

Genes required for mycobacterial growth defined by high density mutagenesis

1 reference

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10 June 2018

Damage recovery pathways in Saccharomyces cerevisiae revealed by genomic phenotyping and interactome mapping.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4696536

10 June 2018

Systematic genetic analysis with ordered arrays of yeast deletion mutants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4696536

10 June 2018

Hyperactive transposase mutants of the Himar1 mariner transposon.

1 reference

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10 June 2018

Systematic identification of essential genes by in vitro mariner mutagenesis

1 reference

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10 June 2018

A purified mariner transposase is sufficient to mediate transposition in vitro

1 reference

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10 June 2018

Competence for genetic transformation in encapsulated strains of Streptococcus pneumoniae: two allelic variants of the peptide pheromone

1 reference

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10 June 2018

Ordering gene function: the interpretation of epistasis in regulatory hierarchies

1 reference

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Biosafety: guidelines for working with pathogenic and infectious microorganisms

1 reference

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The bacteria fight back

1 reference

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DNA helicase gene interaction network defined using synthetic lethality analyzed by microarray

1 reference

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13 August 2018

Identification of novel factors involved in colonization and acid tolerance of Vibrio cholerae

1 reference

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A global view of epistasis

1 reference

https://api.crossref.org/works/10.1002%2F9780471729259.MC01E03S36

21 January 2018

A Robust Toolkit for Functional Profiling of the Yeast Genome

1 reference

https://api.crossref.org/works/10.1002%2F9780471729259.MC01E03S36

21 January 2018

Exploring the Mode-of-Action of Bioactive Compounds by Chemical-Genetic Profiling in Yeast

1 reference

https://api.crossref.org/works/10.1002%2F9780471729259.MC01E03S36

21 January 2018

Media preparation and bacteriological tools

1 reference

https://pubmed.ncbi.nlm.nih.gov/25641100

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Common bacterial culture techniques and media

1 reference

https://pubmed.ncbi.nlm.nih.gov/25641100

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantitation of DNA and RNA with absorption and fluorescence spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/25641100

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Microvolume quantitation of nucleic acids

1 reference

https://pubmed.ncbi.nlm.nih.gov/25641100

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1002/9780471729259.MC01E03S36

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25641100%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25641100%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25641100%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

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