(Q57980812)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20694005%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

title

Structural rearrangements of the ribosome at the tRNA proofreading step (English)

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9 February 2020

1

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9 February 2020

author name string

Natalia Demeshkina

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20694005%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

Gulnara Yusupova

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20694005%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

Marat Yusupov

series ordinal

4

1 reference

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9 February 2020

publication date

8 August 2010

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20694005%20AND%20SRC:MED&resulttype=core&format=json

Nature Structural & Molecular Biology

9 February 2020

published in

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9 February 2020

volume

17

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9 February 2020

issue

9

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9 February 2020

page(s)

1072-1078

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https://scigraph.springernature.com/pub.10.1038/nsmb.1880

9 February 2020

exact match

0 references

cites work

The accuracy of protein biosynthesis is limited by its speed: high fidelity selection by ribosomes of aminoacyl-tRNA ternary complexes containing GTP[gamma S].

1 reference

Counting cycles of EF-Tu to measure proofreading in translation

31 March 2020

1 reference

Kinetic Proofreading: A New Mechanism for Reducing Errors in Biosynthetic Processes Requiring High Specificity

31 March 2020

1 reference

Kinetic amplification of enzyme discrimination

31 March 2020

1 reference

Application of a Theory of Enzyme Specificity to Protein Synthesis

31 March 2020

1 reference

Induced fit in initial selection and proofreading of aminoacyl-tRNA on the ribosome

31 March 2020

1 reference

Recognition and selection of tRNA in translation

31 March 2020

1 reference

The ribosome's response to codon-anticodon mismatches.

31 March 2020

1 reference

Fidelity at the molecular level: lessons from protein synthesis

31 March 2020

1 reference

The frequency of translational misreading errors in E. coli is largely determined by tRNA competition.

31 March 2020

1 reference

Fidelity of aminoacyl-tRNA selection on the ribosome: kinetic and structural mechanisms

31 March 2020

1 reference

Selective perturbation of G530 of 16 S rRNA by translational miscoding agents and a streptomycin-dependence mutation in protein S12.

31 March 2020

1 reference

Interaction of antibiotics with functional sites in 16S ribosomal RNA

31 March 2020

1 reference

Binding of tRNA to the ribosomal A and P sites protects two distinct sets of nucleotides in 16 S rRNA.

31 March 2020

1 reference

Recognition of the codon-anticodon helix by ribosomal RNA.

31 March 2020

1 reference

Paromomycin binding induces a local conformational change in the A-site of 16 S rRNA

31 March 2020

1 reference

Recognition of cognate transfer RNA by the 30S ribosomal subunit

31 March 2020

1 reference

Structure of the 30S ribosomal subunit

31 March 2020

1 reference

The Crystal Structure of the Ribosome Bound to EF-Tu and Aminoacyl-tRNA

31 March 2020

1 reference

Selection of tRNA by the ribosome requires a transition from an open to a closed form

31 March 2020

1 reference

Crystal structure of the ribosome at 5.5 A resolution

31 March 2020

1 reference

Insights into substrate stabilization from snapshots of the peptidyl transferase center of the intact 70S ribosome

31 March 2020

1 reference

Differentiating between near- and non-cognate codons in Saccharomyces cerevisiae

31 March 2020

1 reference

Structural aspects of messenger RNA reading frame maintenance by the ribosome

31 March 2020

1 reference

The contribution of metal ions to the structural stability of the large ribosomal subunit

31 March 2020

1 reference

Structure of the 70S ribosome complexed with mRNA and tRNA

31 March 2020

1 reference

Crystal structure of a translation termination complex formed with release factor RF2

31 March 2020

1 reference

Crystal structure of the 30 s ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16 s RNA

31 March 2020

1 reference

An induced-fit mechanism to promote peptide bond formation and exclude hydrolysis of peptidyl-tRNA.

31 March 2020

1 reference

Ribosomal catalysis: the evolution of mechanistic concepts for peptide bond formation and peptidyl-tRNA hydrolysis.

31 March 2020

1 reference

Initiator tRNAs have a unique anticodon loop conformation

31 March 2020

1 reference

tRNomics: analysis of tRNA genes from 50 genomes of Eukarya, Archaea, and Bacteria reveals anticodon-sparing strategies and domain-specific features

31 March 2020

1 reference

The RNA Modification Database: 1999 update

31 March 2020

1 reference

Possibilities for the evolution of the genetic code from a preceding form

31 March 2020

1 reference

Structural basis for mRNA and tRNA positioning on the ribosome

31 March 2020

1 reference

Formation of the First Peptide Bond: The Structure of EF-P Bound to the 70S Ribosome

31 March 2020

1 reference

A uniform response to mismatches in codon-anticodon complexes ensures ribosomal fidelity.

31 March 2020

1 reference

Purine bases at position 37 of tRNA stabilize codon-anticodon interaction in the ribosomal A site by stacking and Mg2+-dependent interactions

31 March 2020

1 reference

An active role for tRNA in decoding beyond codon:anticodon pairing

31 March 2020

1 reference

Transfer RNA structure and coding specificity. I. Evidence that a D-arm mutation reduces tRNA dissociation from the ribosome.

31 March 2020

1 reference

Effect of photochemical crosslink S4U(8)-C(13) on suppressor activity of su+ tRNATrp from Escherichia coli

31 March 2020

1 reference

Visualization of the hybrid state of tRNA binding promoted by spontaneous ratcheting of the ribosome

31 March 2020

1 reference

Multiple effects of S13 in modulating the strength of intersubunit interactions in the ribosome during translation

31 March 2020

1 reference

A ratchet-like inter-subunit reorganization of the ribosome during translocation

31 March 2020

1 reference

Structures of the ribosome in intermediate states of ratcheting

31 March 2020

1 reference

Domain movements of elongation factor eEF2 and the eukaryotic 80S ribosome facilitate tRNA translocation

31 March 2020

1 reference

Kinetic determinants of high-fidelity tRNA discrimination on the ribosome

31 March 2020

1 reference

tRNA selection and kinetic proofreading in translation

31 March 2020

1 reference

The role of 23S ribosomal RNA residue A2451 in peptide bond synthesis revealed by atomic mutagenesis.

31 March 2020

1 reference

Structural and sequence elements important for recognition of Escherichia coli formylmethionine tRNA by methionyl-tRNA transformylase are clustered in the acceptor stem

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20694005

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Mutants of initiator tRNA that function both as initiators and elongators

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20694005

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Effect of Mg2+ concentration, polyamines, streptomycin, and mutations in ribosomal proteins on the accuracy of the two-step selection of aminoacyl-tRNAs in protein biosynthesis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20694005

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NSMB.1880

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20694005%20AND%20SRC:MED&resulttype=core&format=json

9 February 2020

1 reference