(Q58698019)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

title

Whole Genome Sequencing for Determining the Source of Mycobacterium bovis Infections in Livestock Herds and Wildlife in New Zealand (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

main subject

whole genome sequencing

1 reference

1 reference

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Rowland Kao

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

author name string

Paul Livingstone

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Mark Neill

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Jane Sinclair

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Brent Paterson

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Gillian Atkinson

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Garry Knowles

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Kevin Crews

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Joseph Crispell

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Suelee Robbe-Austerman

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Tod Stuber

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Julian Parkhill

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

James Wood

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Simon Harris

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Marian Price-Carter

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Geoffrey W de Lisle

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

Desmond M Collins

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

publication date

30 October 2018

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

Frontiers in Veterinary Science

3 May 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

volume

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

page(s)

272

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

3 May 2020

copyright license

start time

30 October 2018

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Epidemiological links between tuberculosis cases identified twice as efficiently by whole genome sequencing than conventional molecular typing: A population-based study.

30 November 2018

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Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates.

30 November 2018

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30 November 2018

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Use of whole-genome sequencing and evaluation of the apparent sensitivity and specificity of antemortem tuberculosis tests in the investigation of an unusual outbreak of Mycobacterium bovis infection in a Michigan dairy herd.

30 November 2018

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30 November 2018

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30 November 2018

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Using whole genome sequencing to investigate transmission in a multi-host system: bovine tuberculosis in New Zealand

30 November 2018

1 reference

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Use of genomics to track bovine tuberculosis transmission.

30 November 2018

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30 November 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

Molecular Relationship between Strains of M. bovis from Mexico and Those from Countries with Free Trade of Cattle with Mexico

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

Use of bacterial whole-genome sequencing to investigate local persistence and spread in bovine tuberculosis

30 November 2018

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Descriptive Epidemiology and Whole Genome Sequencing Analysis for an Outbreak of Bovine Tuberculosis in Beef Cattle and White-Tailed Deer in Northwestern Minnesota

30 November 2018

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Limitations of variable number of tandem repeat typing identified through whole genome sequencing of Mycobacterium avium subsp. paratuberculosis on a national and herd level

30 November 2018

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Development of the New Zealand strategy for local eradication of tuberculosis from wildlife and livestock

30 November 2018

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Toward eradication: the effect of Mycobacterium bovis infection in wildlife on the evolution and future direction of bovine tuberculosis management in New Zealand

30 November 2018

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Epidemiology, diagnostics, and management of tuberculosis in domestic cattle and deer in New Zealand in the face of a wildlife reservoir

30 November 2018

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Quantification of historical livestock importation into New Zealand 1860-1979.

30 November 2018

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Bacteriological diagnosis and molecular strain typing of Mycobacterium bovis and Mycobacterium caprae.

30 November 2018

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30 November 2018

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Inferring patient to patient transmission of Mycobacterium tuberculosis from whole genome sequencing data

30 November 2018

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Whole genome sequencing reveals local transmission patterns of Mycobacterium bovis in sympatric cattle and badger populations

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

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30 November 2018

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30 November 2018

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30 November 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

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30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

The global distribution and phylogeography of Mycobacterium bovis clonal complexes

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

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30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

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30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

Comparison of 45 variable number tandem repeat (VNTR) and two direct repeat (DR) assays to restriction endonuclease analysis for typing isolates of Mycobacterium bovis

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

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30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

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30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

The Sequence Alignment/Map format and SAMtools

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

Bottlenecks and broomsticks: the molecular evolution of Mycobacterium bovis

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

MUSCLE: multiple sequence alignment with high accuracy and high throughput

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

The complete genome sequence of Mycobacterium bovis

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

Tuberculosis in free-ranging wildlife: detection, diagnosis and management.

30 November 2018

1 reference

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Molecular epidemiology of Mycobacterium bovis: exploiting molecular data

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

Molecular epidemiology of bovine tuberculosis. II. Applications of genotyping.

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

Molecular epidemiology of bovine tuberculosis. I. Mycobacterium bovis genotyping.

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

Geographic distribution of restriction types of Mycobacterium bovis isolates from brush-tailed possums (Trichosurus vulpecula) in New Zealand

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

Occurrence and stability of insertion sequences in Mycobacterium tuberculosis complex strains: evaluation of an insertion sequence-dependent DNA polymorphism as a tool in the epidemiology of tuberculosis

30 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6218598

Isolation of Mycobacterium bovis and other mycobacterial species from ferrets and stoats

30 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/30425997

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Prevalence and Characterization of Heterogeneous Variable-Number Tandem-Repeat Clusters Comprising Drug-Susceptible and/or Variable Resistant Mycobacterium tuberculosis Complex Isolates in the Netherlands from 2004 to 2016

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/30425997

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.3389/FVETS.2018.00272

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30425997%20AND%20SRC:MED&resulttype=core&format=json

3 May 2020

1 reference