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Molecular dynamics simulations of Cu,Zn superoxide dismutase: effect of temperature on dimer asymmetry
scientific article published on 01 October 1999
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Europe PubMed Central
PubMed publication ID
17030335
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17030335%20AND%20SRC:MED&resulttype=core&format=json
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20 December 2019
title
Molecular dynamics simulations of Cu,Zn superoxide dismutase: effect of temperature on dimer asymmetry
(English)
1 reference
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Europe PubMed Central
PubMed publication ID
17030335
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17030335%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 December 2019
author
Mattia Falconi
series ordinal
1
1 reference
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Europe PubMed Central
PubMed publication ID
17030335
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17030335%20AND%20SRC:MED&resulttype=core&format=json
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20 December 2019
Alessandro Desideri
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3
1 reference
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Europe PubMed Central
PubMed publication ID
17030335
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17030335%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 December 2019
author name string
S Melchionna
series ordinal
2
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Europe PubMed Central
PubMed publication ID
17030335
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17030335%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 December 2019
publication date
1 October 1999
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Europe PubMed Central
PubMed publication ID
17030335
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17030335%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 December 2019
published in
Biophysical Chemistry
1 reference
stated in
Europe PubMed Central
PubMed publication ID
17030335
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17030335%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 December 2019
volume
81
1 reference
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Europe PubMed Central
PubMed publication ID
17030335
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17030335%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 December 2019
issue
3
1 reference
stated in
Europe PubMed Central
PubMed publication ID
17030335
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17030335%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 December 2019
page(s)
197-205
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Europe PubMed Central
PubMed publication ID
17030335
reference URL
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20 December 2019
cites work
Aspects of the Structure, Function, and Applications of Superoxide Dismutas
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0301-4622%2899%2900094-0
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The role of arginine 143 in the electrostatics and mechanism of Cu,Zn superoxide dismutase: computational and experimental evaluation by mutational analysis
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0301-4622%2899%2900094-0
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7 January 2021
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Computational, pulse-radiolytic, and structural investigations of lysine-136 and its role in the electrostatic triad of human Cu,Zn superoxide dismutase
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0301-4622%2899%2900094-0
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7 January 2021
based on heuristic
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Modulation of the catalytic rate of Cu,Zn superoxide dismutase in single and double mutants of conserved positively and negatively charged residues.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0301-4622%2899%2900094-0
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7 January 2021
based on heuristic
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Role of the electrostatic loop charged residues in Cu,Zn superoxide dismutase
1 reference
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Crossref
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https://api.crossref.org/works/10.1016%2FS0301-4622%2899%2900094-0
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7 January 2021
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Family of G protein alpha chains: amphipathic analysis and predicted structure of functional domains
1 reference
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7 January 2021
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Point charge distributions and electrostatic steering in enzyme/substrate encounter: Brownian dynamics of modified copper/zinc superoxide dismutases
1 reference
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7 January 2021
based on heuristic
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Determination and analysis of the 2 A-structure of copper, zinc superoxide dismutase
1 reference
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7 January 2021
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Three-dimensional structure of Cu,Zn-superoxide dismutase from spinach at 2.0 A resolution
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0301-4622%2899%2900094-0
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Crystal structure of yeast Cu,Zn superoxide dismutase. Crystallographic refinement at 2.5 A resolution
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0301-4622%2899%2900094-0
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7 January 2021
based on heuristic
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Atomic structures of wild-type and thermostable mutant recombinant human Cu,Zn superoxide dismutase
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0301-4622%2899%2900094-0
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7 January 2021
based on heuristic
inferred from DOI database lookup
Unusual trigonal-planar copper configuration revealed in the atomic structure of yeast copper-zinc superoxide dismutase
1 reference
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7 January 2021
based on heuristic
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Dimer asymmetry in superoxide dismutase studied by molecular dynamics simulation
1 reference
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Crossref
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https://api.crossref.org/works/10.1016%2FS0301-4622%2899%2900094-0
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7 January 2021
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inferred from DOI database lookup
The essential dynamics of Cu, Zn superoxide dismutase: suggestion of intersubunit communication
1 reference
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https://api.crossref.org/works/10.1016%2FS0301-4622%2899%2900094-0
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7 January 2021
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Subunit asymmetry in the three-dimensional structure of a human CuZnSOD mutant found in familial amyotrophic lateral sclerosis
1 reference
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7 January 2021
based on heuristic
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Crystallographic structures of bovine copper-zinc superoxide dismutase reveal asymmetry in two subunits: functionally important three and five coordinate copper sites captured in the same crystal
1 reference
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Crossref
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The Protein Data Bank: a computer-based archival file for macromolecular structures
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7 January 2021
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DL_POLY_2.0: a general-purpose parallel molecular dynamics simulation package.
1 reference
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7 January 2021
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Superoxide dismutase: fluctuations in the structure and solvation of the active site channel studied by molecular dynamics simulation
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7 January 2021
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Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes
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7 January 2021
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Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features
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7 January 2021
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The interpretation of protein structures: Total volume, group volume distributions and packing density
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7 January 2021
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Calculation of molecular volumes and areas for structures of known geometry.
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Dynamics of hydrogen atoms in superoxide dismutase by quasielastic neutron scattering
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Crystalline ribonuclease A loses function below the dynamical transition at 220 K
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Thermal motions and function of bacteriorhodopsin in purple membranes: effects of temperature and hydration studied by neutron scattering
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Enzyme activity below the dynamical transition at 220 K.
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7 January 2021
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Mechanism of action of superoxide dismutase from pulse radiolysis and electron paramagnetic resonance. Evidence that only half the active sites function in catalysis
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The binding of copper ions to copper-free bovine superoxide dismutase. Copper distribution in protein samples recombined with less than stoicheiometric copper ion/protein ratios
1 reference
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The binding of copper ions to copper-free bovine superoxide dismutase. Kinetic aspects
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A spectroscopic and molecular dynamics study of native and of a mutant of Xenopus laevis Cu,Zn superoxide dismutase: mechanistic consequences of replacing four charged amino acids on the `electrostatic' loop
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MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures
1 reference
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https://api.crossref.org/works/10.1016%2FS0301-4622%2899%2900094-0
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7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1016/S0301-4622(99)00094-0
1 reference
stated in
Europe PubMed Central
PubMed publication ID
17030335
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17030335%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 December 2019
PubMed publication ID
17030335
1 reference
stated in
Europe PubMed Central
PubMed publication ID
17030335
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17030335%20AND%20SRC:MED&resulttype=core&format=json
retrieved
20 December 2019
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