(Q61489847)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29912461%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

title

Exploiting CRISPR-Cas9 technology to investigate individual histone modifications (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29912461%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

1 reference

5 February 2019

1 reference

6 February 2019

Suppressor of clathrin deficiency 6, putative

1 reference

6 February 2019

1 reference

0 references

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29912461%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

Tim Nicolai Siegel

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29912461%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

author name string

Juan-José Vasquez

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29912461%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

Carolin Wedel

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29912461%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

language of work or name

English

0 references

publication date

1 October 2018

1 reference

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31 March 2020

published in

Nucleic Acids Research

1 reference

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31 March 2020

volume

46

1 reference

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31 March 2020

issue

18

1 reference

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31 March 2020

page(s)

e106

1 reference

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Creative Commons Attribution-NonCommercial 4.0 International

31 March 2020

copyright license

start time

15 June 2018

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Cultivation and in vitro cloning or procyclic culture forms of Trypanosoma brucei in a semi-defined medium. Short communication

1 reference

12 December 2020

Genetic analysis of histone H4: essential role of lysines subject to reversible acetylation

1 reference

12 December 2020

Extremely conserved histone H4 N terminus is dispensable for growth but essential for repressing the silent mating loci in yeast

1 reference

12 December 2020

Gene expression mediated by bacteriophage T3 and T7 RNA polymerases in transgenic trypanosomes

1 reference

12 December 2020

The region encompassing the procyclic acidic repetitive protein (PARP) gene promoter plays a role in plasmid DNA replication in Trypanosoma brucei

1 reference

12 December 2020

A conserved stem-loop structure in the 3' untranslated region of procyclin mRNAs regulates expression in Trypanosoma brucei.

1 reference

12 December 2020

Autonomously replicating single-copy episomes in Trypanosoma brucei show unusual stability

1 reference

12 December 2020

Mechanisms of developmental regulation in Trypanosoma brucei: a polypyrimidine tract in the 3'-untranslated region of a surface protein mRNA affects RNA abundance and translation.

1 reference

12 December 2020

Elements in the 3' untranslated region of procyclin mRNA regulate expression in insect forms of Trypanosoma brucei by modulating RNA stability and translation

1 reference

12 December 2020

Structure of the Trypanosoma brucei U6 snRNA gene promoter

1 reference

12 December 2020

Double-stranded RNA induces mRNA degradation in Trypanosoma brucei

1 reference

12 December 2020

Genomic maps and comparative analysis of histone modifications in human and mouse

1 reference

12 December 2020

Tagging a T. brucei RRNA locus improves stable transfection efficiency and circumvents inducible expression position effects

1 reference

12 December 2020

Systematic study of sequence motifs for RNA trans splicing in Trypanosoma brucei

1 reference

12 December 2020

A vector series for rapid PCR-mediated C-terminal in situ tagging of Trypanosoma brucei genes.

1 reference

12 December 2020

Unusual histone modifications in Trypanosoma brucei

1 reference

12 December 2020

Post-transcriptional control of nuclear-encoded cytochrome oxidase subunits in Trypanosoma brucei: evidence for genome-wide conservation of life-cycle stage-specific regulatory elements

1 reference

12 December 2020

Highly efficient stable transformation of bloodstream forms of Trypanosoma brucei.

1 reference

12 December 2020

CRE recombinase-based positive-negative selection systems for genetic manipulation in Trypanosoma brucei

1 reference

12 December 2020

Multivalent engagement of chromatin modifications by linked binding modules

1 reference

12 December 2020

Codon usage suggests that translational selection has a major impact on protein expression in trypanosomatids

1 reference

12 December 2020

Acetylation of histone H4K4 is cell cycle regulated and mediated by HAT3 in Trypanosoma brucei.

1 reference

12 December 2020

Heat shock causes a decrease in polysomes and the appearance of stress granules in trypanosomes independently of eIF2(alpha) phosphorylation at Thr169

1 reference

12 December 2020

Four histone variants mark the boundaries of polycistronic transcription units in Trypanosoma brucei

1 reference

12 December 2020

The Sequence Alignment/Map format and SAMtools

1 reference

12 December 2020

BEDTools: a flexible suite of utilities for comparing genomic features

1 reference

12 December 2020

Histone H3 trimethylated at lysine 4 is enriched at probable transcription start sites in Trypanosoma brucei

1 reference

12 December 2020

Genome-wide RNAi screens in bloodstream form trypanosomes identify drug transporters.

1 reference

12 December 2020

The role of the 5'-3' exoribonuclease XRNA in transcriptome-wide mRNA degradation

1 reference

12 December 2020

VarScan 2: somatic mutation and copy number alteration discovery in cancer by exome sequencing

1 reference

12 December 2020

Trypanosomal histone γH2A and the DNA damage response

1 reference

12 December 2020

RazerS 3: faster, fully sensitive read mapping

1 reference

12 December 2020

Multiplex genome engineering using CRISPR/Cas systems

1 reference

12 December 2020

RNA-guided human genome engineering via Cas9

1 reference

12 December 2020

A histone mutant reproduces the phenotype caused by loss of histone-modifying factor Polycomb.

1 reference

12 December 2020

Chromatin remodeling at DNA double-strand breaks

1 reference

12 December 2020

DNA break site at fragile subtelomeres determines probability and mechanism of antigenic variation in African trypanosomes

1 reference

12 December 2020

SCD6 induces ribonucleoprotein granule formation in trypanosomes in a translation-independent manner, regulated by its Lsm and RGG domains

1 reference

12 December 2020

High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells

1 reference

12 December 2020

DNA targeting specificity of RNA-guided Cas9 nucleases

1 reference

12 December 2020

High-throughput profiling of off-target DNA cleavage reveals RNA-programmed Cas9 nuclease specificity

1 reference

12 December 2020

Self-processing of ribozyme-flanked RNAs into guide RNAs in vitro and in vivo for CRISPR-mediated genome editing

1 reference

12 December 2020

Comparative ribosome profiling reveals extensive translational complexity in different Trypanosoma brucei life cycle stages.

1 reference

12 December 2020

Genome editing in the human malaria parasite Plasmodium falciparum using the CRISPR-Cas9 system.

1 reference

12 December 2020

Efficient CRISPR-Cas9-mediated genome editing in Plasmodium falciparum.

1 reference

12 December 2020

Transcriptome-wide analysis of trypanosome mRNA decay reveals complex degradation kinetics and suggests a role for co-transcriptional degradation in determining mRNA levels

1 reference

12 December 2020

Locus-specific control of DNA resection and suppression of subtelomeric VSG recombination by HAT3 in the African trypanosome

1 reference

12 December 2020

Genome engineering using CRISPR-Cas9 system.

1 reference

12 December 2020

Chromatin decondensation is sufficient to alter nuclear organization in embryonic stem cells.

1 reference

12 December 2020

CRISPR-Cas9-mediated single-gene and gene family disruption in Trypanosoma cruzi

1 reference

12 December 2020

A toolkit enabling efficient, scalable and reproducible gene tagging in trypanosomatids.

1 reference

12 December 2020

First efficient CRISPR-Cas9-mediated genome editing in Leishmania parasites.

1 reference

12 December 2020

Flexible guide-RNA design for CRISPR applications using Protospacer Workbench.

1 reference

12 December 2020

Fragment ion patchwork quantification for measuring site-specific acetylation degrees.

1 reference

12 December 2020

Genome-wide analysis of chromatin structures in Trypanosoma brucei using high-resolution MNase-ChIP-seq

1 reference

12 December 2020

A CRISPR Cas9 high-throughput genome editing toolkit for kinetoplastids

1 reference

12 December 2020

Homologous Recombination in Protozoan Parasites and Recombinase Inhibitors

1 reference

12 December 2020

Codon choice directs constitutive mRNA levels in trypanosomes.

1 reference

12 December 2020

Codon usage bias controls mRNA and protein abundance in trypanosomatids.

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKY517

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29912461%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29912461%20AND%20SRC:MED&resulttype=core&format=json

31 March 2020

1 reference