(Q61904325)

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10 January 2020

title

Chemical shifts provide fold populations and register of beta hairpins and beta sheets (English)

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10 January 2020

5

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10 January 2020

author name string

R Matthew Fesinmeyer

1

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10 January 2020

F Michael Hudson

2

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10 January 2020

Katherine A Olsen

3

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10 January 2020

George W N White

4

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10 January 2020

Niels H Andersen

6

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10 January 2020

publication date

1 December 2005

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Journal of Biomolecular NMR

10 January 2020

published in

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10 January 2020

volume

33

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10 January 2020

issue

4

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10 January 2020

page(s)

213-231

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https://scigraph.springernature.com/pub.10.1007/s10858-005-3731-7

10 January 2020

exact match

0 references

cites work

Dissecting the structure of a partially folded protein. Circular dichroism and nuclear magnetic resonance studies of peptides from ubiquitin

1 reference

12 December 2020

A short linear peptide derived from the N-terminal sequence of ubiquitin folds into a water-stable non-native β-hairpin

1 reference

12 December 2020

'Random coil' 1H chemical shifts obtained as a function of temperature and trifluoroethanol concentration for the peptide series GGXGG.

1 reference

12 December 2020

Enhanced hairpin stability through loop design: the case of the protein G B1 domain hairpin

1 reference

12 December 2020

Thermodynamics of a beta-hairpin structure: evidence for cooperative formation of folding nucleus

1 reference

12 December 2020

Conformational investigation of designed short linear peptides able to fold into beta-hairpin structures in aqueous solution

1 reference

12 December 2020

Interstrand side chain--side chain interactions in a designed beta-hairpin: significance of both lateral and diagonal pairings

1 reference

12 December 2020

Three-dimensional structure of RTD-1, a cyclic antimicrobial defensin from Rhesus macaque leukocytes

1 reference

12 December 2020

Thermodynamic Analysis of β-Hairpin-Forming Peptides from the Thermal Dependence of1H NMR Chemical Shifts

1 reference

12 December 2020

Conformation of beta hairpins in protein structures: classification and diversity in homologous structures

1 reference

12 December 2020

Factors involved in the stability of isolated beta-sheets: Turn sequence, beta-sheet twisting, and hydrophobic surface burial

1 reference

12 December 2020

A Designed beta-Hairpin Containing a Natural Hydrophobic Cluster This research was supported by the National Science Foundation (CHE-9820952). J.F.E. was supported by a fellowship from the Ministerio de Educacion y Cultura (Spain) and the Fulbright

1 reference

12 December 2020

Dissecting the stability of a beta-hairpin peptide that folds in water: NMR and molecular dynamics analysis of the beta-turn and beta-strand contributions to folding

1 reference

12 December 2020

Computer-aided design of beta-sheet peptides

1 reference

12 December 2020

De novo design and structural analysis of a model beta-hairpin peptide system

1 reference

12 December 2020

The geometry and efficacy of cation–π interactions in a diagonal position of a designed β‐hairpin

1 reference

12 December 2020

Stabilization of beta-hairpin peptides by salt bridges: role of preorganization in the energetic contribution of weak interactions

1 reference

12 December 2020

Studies of synthetic helical peptides using circular dichroism and nuclear magnetic resonance

1 reference

12 December 2020

Automated prediction of 15N, 13Calpha, 13Cbeta and 13C' chemical shifts in proteins using a density functional database

1 reference

12 December 2020

Influence of N-methylation on a cation-pi interaction produces a remarkably stable beta-hairpin peptide

1 reference

12 December 2020

Effects of amino acid phi,psi propensities and secondary structure interactions in modulating H alpha chemical shifts in peptide and protein beta-sheet.

1 reference

12 December 2020

Hairpin folding dynamics: the cold-denatured state is predisposed for rapid refolding

1 reference

12 December 2020

Role of beta-turn residues in beta-hairpin formation and stability in designed peptides.

1 reference

12 December 2020

Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions

1 reference

12 December 2020

13C(alpha) and 13C(beta) chemical shifts as a tool to delineate beta-hairpin structures in peptides

1 reference

12 December 2020

Influence of strand number on antiparallel beta-sheet stability in designed three- and four-stranded beta-sheets

1 reference

12 December 2020

Effects of turn residues in directing the formation of the beta-sheet and in the stability of the beta-sheet.

1 reference

12 December 2020

Random coil chemical shifts in acidic 8 M urea: implementation of random coil shift data in NMRView

1 reference

12 December 2020

Medium-dependence of the secondary structure of exendin-4 and glucagon-like-peptide-1

1 reference

12 December 2020

Does the solid-state structure of endothelin-1 provide insights concerning the solution-state conformational equilibrium?

1 reference

12 December 2020

Tryptophan zippers: Stable, monomeric -hairpins

1 reference

12 December 2020

Chemical shifts as a tool for structure determination

1 reference

12 December 2020

Folding cooperativity in a three-stranded beta-sheet model

1 reference

12 December 2020

Turn stability in β-hairpin peptides: Investigation of peptides containing 3:5 type I G1 bulge turns

1 reference

12 December 2020

N- and C-capping preferences for all 20 amino acids in alpha-helical peptides

1 reference

12 December 2020

Amide proton temperature coefficients as hydrogen bond indicators in proteins

1 reference

12 December 2020

Investigation of the nature of the methionine-pi interaction in beta-hairpin peptide model systems

1 reference

12 December 2020

The turn sequence directs beta-strand alignment in designed beta-hairpins

1 reference

12 December 2020

Helix-coil transition of the isolated amino terminus of ribonuclease

1 reference

12 December 2020

Relationship between nuclear magnetic resonance chemical shift and protein secondary structure

1 reference

12 December 2020

1H, 13C and 15N random coil NMR chemical shifts of the common amino acids. I. Investigations of nearest-neighbor effects

1 reference

12 December 2020

The mechanism of beta-hairpin formation

1 reference

12 December 2020

Knowledge-based protein secondary structure assignment

1 reference

12 December 2020

Probing the structural determinants of type II' beta-turn formation in peptides and proteins

1 reference

12 December 2020

Folding of Protein G B1 Domain Studied by the Conformational Characterization of Fragments Comprising Its Secondary Structure Elements

1 reference

12 December 2020

Infrared study of the stability and folding kinetics of a 15-residue beta-hairpin

1 reference

12 December 2020

Folding dynamics and mechanism of beta-hairpin formation

1 reference

12 December 2020

A designed beta-hairpin peptide in crystals

1 reference

12 December 2020

Analysis of the factors that stabilize a designed two-stranded antiparallel beta-sheet

1 reference

12 December 2020

Insights into the determinants of ��-sheet stability: 1H and 13C��NMR conformational investigation of three-stranded antiparallel ��-sheet-forming peptides

1 reference

12 December 2020

A short linear peptide that folds into a native stable beta-hairpin in aqueous solution

1 reference

12 December 2020

Probing multiple effects on 15N, 13C alpha, 13C beta, and 13C' chemical shifts in peptides using density functional theory

1 reference

12 December 2020

Beta-structure in human amylin and two designer beta-peptides: CD and NMR spectroscopic comparisons suggest soluble beta-oligomers and the absence of significant populations of beta-strand dimers

1 reference

12 December 2020

Sequence dependence of beta-hairpin structure: comparison of a salt bridge and an aromatic interaction

1 reference

12 December 2020

Interplay between hydrophobic cluster and loop propensity in beta-hairpin formation

1 reference

12 December 2020

Analysis of proton chemical shifts in regular secondary structure of proteins

1 reference

12 December 2020

10.1007/S10858-005-3731-7

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16341751%20AND%20SRC:MED&resulttype=core&format=json

10 January 2020

1 reference