(Q70759361)

English

Physical organization of the upper pathway operon promoter of the Pseudomonas TOL plasmid. Sequence and positional requirements for XylR-dependent activation of transcription

scientific article published on 01 May 1993

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scholarly article

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8510657%20AND%20SRC:MED&resulttype=core&format=json

13 October 2019

Physical organization of the upper pathway operon promoter of the Pseudomonas TOL plasmid. Sequence and positional requirements for XylR-dependent activation of transcription (English)

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8510657%20AND%20SRC:MED&resulttype=core&format=json

13 October 2019

Juan Luis Ramos Martín

2

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8510657%20AND%20SRC:MED&resulttype=core&format=json

13 October 2019

author name string

M A Abril

1

1 reference

Europe PubMed Central

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13 October 2019

publication date

1 May 1993

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8510657%20AND%20SRC:MED&resulttype=core&format=json

13 October 2019

Molecular Genetics and Genomics

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8510657%20AND%20SRC:MED&resulttype=core&format=json

13 October 2019

239

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8510657%20AND%20SRC:MED&resulttype=core&format=json

13 October 2019

1-2

1 reference

Europe PubMed Central

PubMed publication ID

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13 October 2019

281-288

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8510657%20AND%20SRC:MED&resulttype=core&format=json

13 October 2019

https://scigraph.springernature.com/pub.10.1007/bf00281629

0 references

Functional replacement of a protein-induced bend in a DNA recombination site

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

In vitro activity of the nitrogen fixation regulatory protein NIFA.

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Promoter-upstream activator sequences are required for expression of the xylS gene and upper-pathway operon on the Pseudomonas TOL plasmid

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ntr-like promoters and upstream regulatory sequence ftr are required for transcription of a developmentally regulated Caulobacter crescentus flagellar gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The -24/-12 promoter comes of age.

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Upstream binding sequences of the XylR activator protein and integration host factor in the xylS gene promoter region of the Pseudomonas TOL plasmid

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Integration host factor (IHF) represses a Chlamydomonas chloroplast promoter in E. coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

32 Oligonucleotide-directed mutagenesis of DNA fragments cloned into M13 vectors

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DNA-looping and enhancer activity: association between DNA-bound NtrC activator and RNA polymerase at the bacterial glnA promoter

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rapid and efficient site-specific mutagenesis without phenotypic selection

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Involvement of Pseudomonas putida RpoN sigma factor in regulation of various metabolic functions

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nucleotide sequence surrounding transcription initiation site of xylABC operon on TOL plasmid of Pseudomonas putida

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The xylABC promoter from the Pseudomonas putida TOL plasmid is activated by nitrogen regulatory genes in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Initiation of transcription at the bacterial glnAp2 promoter by purified E. coli components is facilitated by enhancers.

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulation of nitrogen fixation genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nitrogen regulation in Salmonella typhimurium. Identification of an ntrC protein-binding site and definition of a consensus binding sequence

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The genetic complexity of nitrogen fixation. The ninth Fleming lecture.

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification and characterization of recD, a gene affecting plasmid maintenance and recombination in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Activation of the Klebsiella pneumoniae nifU promoter: identification of multiple and overlapping upstream NifA binding sites

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression of sigma 54 (ntrA)-dependent genes is probably united by a common mechanism

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phasing of protein-induced DNA bends in a recombination complex.

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcription of glnA in E. coli is stimulated by activator bound to sites far from the promoter

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Upstream regulatory sequence for transcriptional activator XylR in the first operon of xylene metabolism on the TOL plasmid

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conservation between coding and regulatory elements of Rhizobium meliloti and Rhizobium leguminosarum dct genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular cloning of regulatory gene xylR and operator-promoter regions of the xylABC and xylDEGF operons of the TOL plasmid.

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Integration host factor is a negative effector of in vivo and in vitro expression of ompC in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An upstream XylR- and IHF-induced nucleoprotein complex regulates the sigma 54-dependent Pu promoter of TOL plasmid

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of a cis regulatory DNA element necessary for formate induction of the formate dehydrogenase gene (fdhF) of Escherichia coli.

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Probing the Escherichia coli glnALG upstream activation mechanism in vivo

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

In vitro gene fusions that join an enzymatically active beta-galactosidase segment to amino-terminal fragments of exogenous proteins: Escherichia coli plasmid vectors for the detection and cloning of translational initiation signals

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulatory circuits controlling transcription of TOL plasmid operon encoding meta-cleavage pathway for degradation of alkylbenzoates by Pseudomonas

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcriptional activation of the Klebsiella pneumoniae nitrogenase promoter may involve DNA loop formation

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The integration host factor stimulates interaction of RNA polymerase with NIFA, the transcriptional activator for nitrogen fixation operons.

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

In vitro insertional mutagenesis with a selectable DNA fragment

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Activation of the Pseudomonas TOL plasmid upper pathway operon. Identification of binding sites for the positive regulator XylR and for integration host factor protein.

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression of the regulatory gene xylS on the TOL plasmid is positively controlled by the xylR gene product

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Function of a bacterial activator protein that binds to transcriptional enhancers

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulator and enzyme specificities of the TOL plasmid-encoded upper pathway for degradation of aromatic hydrocarbons and expansion of the substrate range of the pathway

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Role of integration host factor in the regulation of the glnHp2 promoter of Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Integration host factor is required for the activation of developmentally regulated genes in Caulobacter

1 reference

https://pubmed.ncbi.nlm.nih.gov/8510657

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/BF00281629

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8510657%20AND%20SRC:MED&resulttype=core&format=json

13 October 2019

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8510657%20AND%20SRC:MED&resulttype=core&format=json

13 October 2019

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