(Q73263792)

English

Analysis of part of the chicken Rfp-Y region reveals two novel lectin genes, the first complete genomic sequence of a class I alpha-chain gene, a truncated class II beta-chain gene, and a large CR1 repeat

scientific article published on 12 April 2003

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scholarly article

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12692693%20AND%20SRC:MED&resulttype=core&format=json

2 November 2019

Analysis of part of the chicken Rfp-Y region reveals two novel lectin genes, the first complete genomic sequence of a class I alpha-chain gene, a truncated class II beta-chain gene, and a large CR1 repeat (English)

1 reference

Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12692693%20AND%20SRC:MED&resulttype=core&format=json

2 November 2019

1

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2 November 2019

4

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2 November 2019

6

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2 November 2019

author name string

Iain Shaw

2

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2 November 2019

Norman Ross

3

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2 November 2019

Lisa Rothwell

5

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2 November 2019

Pete Kaiser

7

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2 November 2019

publication date

12 April 2003

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2 November 2019

1 reference

Europe PubMed Central

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2 November 2019

55

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2 November 2019

2

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2 November 2019

100-108

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2 November 2019

https://scigraph.springernature.com/pub.10.1007/s00251-003-0553-1

0 references

Ly-49D and Ly-49H associate with mouse DAP12 and form activating receptors

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Detailed analysis of the mouse H-2Kb promoter: enhancer-like sequences and their role in the regulation of class I gene expression

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Assignment of Rfp-Y to the chicken major histocompatibility complex/NOR microchromosome and evidence for high-frequency recombination associated with the nucleolar organizer region

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The role of enhancer A in the locus-specific transactivation of classical and nonclassical HLA class I genes by nuclear factor kappa B

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene organisation determines evolution of function in the chicken MHC.

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Two Mhc class I and two Mhc class II genes map to the chicken Rfp-Y system outside the B complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The regulation and expression of MHC class I genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The neighbor-joining method: a new method for reconstructing phylogenetic trees

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interferon-induced transcription of a major histocompatibility class I gene accompanies binding of inducible nuclear factors to the interferon consensus sequence

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The B Blood Group System of Chickens. I. Heterozygosity in Closed Populations.

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hormonal modulation of major histocompatibility complex class I gene expression involves an enhancer A-binding complex consisting of Fra-2 and the p50 subunit of NF-kappa B.

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A chicken middle-repetitive DNA sequence which shares homology with mammalian ubiquitous repeats

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chicken repeat 1 (CR1) elements, which define an ancient family of vertebrate non-LTR retrotransposons, contain two closely spaced open reading frames

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interferon induction of chicken MHC class I gene expression: phylogenetic conservation of the interferon-responsive element

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Non-association between Rfp-Y major histocompatibility complex-like genes and susceptibility to Marek's disease virus-induced tumours in 6(3) x 7(2) F2 intercross chickens.

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regions of homology shared by Rfp-Y and major histocompatibility B complex genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Histocompatibility antigen(s) linked to Rfp-Y (Mhc-like) genes in the chicken

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rfp-Y genotype affects the fate of Rous sarcomas in B2B5 chickens

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Association between the Rfp-Y haplotype and the incidence of Marek's disease in chickens

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cloning of a new lectin-like receptor expressed on human NK cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Partial restriction map of Marek's disease virus DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chicken major histocompatibility complex class II B genes: analysis of interallelic and interlocus sequence variance

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A polymorphic system related to but genetically independent of the chicken major histocompatibility complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A note on the neighbor-joining algorithm of Saitou and Nei.

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulation of immune responses through inhibitory receptors

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A comprehensive set of sequence analysis programs for the VAX

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Shared regulatory elements in the promoters of MHC class I and class II genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Organization of a functional chicken class II B gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chicken repeat 1 elements contain a pol-like open reading frame and belong to the non-long terminal repeat class of retrotransposons

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Linkage of the major histocompatibility (B) complex and the nucleolar organizer in the chicken. Assignment to a microchromosome

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Organization, sequence and nuclease hypersensitivity of repetitive elements flanking the chicken apoVLDLII gene: extended sequence similarity to elements flanking the chicken vitellogenin gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The C-type lectin superfamily in the immune system

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mapping of the genetically independent chicken major histocompatibility complexes B@ and RFP-Y@ to the same microchromosome by two-color fluorescent in situ hybridization

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Linkage of a new member of the lectin supergene family to chicken Mhc genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterisation of two highly oncogenic strains of Marek's disease virus

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Resistance to Marek's disease in chickens with recombinant haplotypes to the major histocompatibility (B) complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A molecular map of the chicken major histocompatibility complex: the class II beta genes are closely linked to the class I genes and the nucleolar organizer.

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

At least one class I gene in restriction fragment pattern-Y (Rfp-Y), the second MHC gene cluster in the chicken, is transcribed, polymorphic, and shows divergent specialization in antigen binding region.

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequence conservation in avian CR1: an interspersed repetitive DNA family evolving under functional constraints

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure and expression of a chicken MHC class I gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rfp-Y region polymorphism and Marek's disease resistance in multitrait immunocompetence-selected chicken lines.

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crystal structure of a lectin-like natural killer cell receptor bound to its MHC class I ligand

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The chicken B locus is a minimal essential major histocompatibility complex.

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The chicken beta 2-microglobulin gene is located on a non-major histocompatibility complex microchromosome: a small, G+C-rich gene with X and Y boxes in the promoter

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Occupancy of upstream regulatory sites in vivo coincides with major histocompatibility complex class I gene expression in mouse tissues

1 reference

https://pubmed.ncbi.nlm.nih.gov/12692693

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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