(Q73567993)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12823965%20AND%20SRC:MED&resulttype=core&format=json

5 November 2019

title

Target DNA bending is an important specificity determinant in target site selection in Tn10 transposition (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12823965%20AND%20SRC:MED&resulttype=core&format=json

5 November 2019

author name string

Patrick A Pribil

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12823965%20AND%20SRC:MED&resulttype=core&format=json

5 November 2019

David B Haniford

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12823965%20AND%20SRC:MED&resulttype=core&format=json

5 November 2019

publication date

1 July 2003

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12823965%20AND%20SRC:MED&resulttype=core&format=json

Journal of Molecular Biology

5 November 2019

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12823965%20AND%20SRC:MED&resulttype=core&format=json

5 November 2019

volume

330

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12823965%20AND%20SRC:MED&resulttype=core&format=json

5 November 2019

issue

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12823965%20AND%20SRC:MED&resulttype=core&format=json

5 November 2019

page(s)

247-259

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12823965%20AND%20SRC:MED&resulttype=core&format=json

Target site selection in transposition

5 November 2019

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Targeting transposition: at home in the genome

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Substrate recognition and induced DNA deformation by transposase at the target-capture stage of Tn10 transposition

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Target DNA structure plays a critical role in Tn7 transposition

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Mismatch-targeted transposition of Mu: a new strategy to map genetic polymorphism

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Excision of Tn10 from the donor site during transposition occurs by flush double-strand cleavages at the transposon termini

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Kinetic and structural analysis of a cleaved donor intermediate and a strand transfer intermediate in Tn10 transposition.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Tn10 transposition via a DNA hairpin intermediate

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Identification and characterization of a pre-cleavage synaptic complex that is an early intermediate in Tn10 transposition

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Tn10 transpososome assembly involves a folded intermediate that must be unfolded for target capture and strand transfer

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Protein-DNA contacts and conformational changes in the Tn10 transpososome during assembly and activation for cleavage

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

The Tn10 synaptic complex can capture a target DNA only after transposon excision.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Intramolecular transposition by Tn10

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

A symmetrical six-base-pair target site sequence determines Tn10 insertion specificity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Tn10 insertion specificity is strongly dependent upon sequences immediately adjacent to the target-site consensus sequence

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Empirical estimation of protein-induced DNA bending angles: applications to lambda site-specific recombination complexes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Plasmid permutation vectors to monitor DNA bending

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Factors responsible for target site selection in Tn10 transposition: a role for the DDE motif in target DNA capture.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

All three residues of the Tn 10 transposase DDE catalytic triad function in divalent metal ion binding

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

The locus of sequence-directed and protein-induced DNA bending

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

[20] Nuclease activity of 1,10-phenanthroline-copper in study of protein—DNA interactions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Substrate recognition and induced DNA distortion by the PI-SceI endonuclease, an enzyme generated by protein splicing

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Crystal structure of the intein homing endonuclease PI-SceI bound to its recognition sequence

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

DNA bending creates favored sites for retroviral integration: an explanation for preferred insertion sites in nucleosomes.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Targeted transposition by the V(D)J recombinase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

IS231A insertion specificity: consensus sequence and DNA bending at the target site

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Refinement of Eco RI endonuclease crystal structure: a revised protein chain tracing

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

The homing endonuclease I-CreI uses three metals, one of which is shared between the two active sites

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

DNA sequence-dependent deformability deduced from protein-DNA crystal complexes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Anatomy of a preferred target site for the bacterial insertion sequence IS903.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

DNA transposition of bacteriophage Mu. A quantitative analysis of target site selection in vitro

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

The gamma delta resolvase induces an unusual DNA structure at the recombinational crossover point

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Divalent cations stabilize unstacked conformations of DNA and RNA by interacting with base pi systems

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Tn7: a target site-specific transposon

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Sequence selectivity and degeneracy of a restriction endonuclease mediated by DNA intercalation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Intercalation, DNA kinking, and the control of transcription.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Saturation mutagenesis of His114 of EcoRI reveals relaxed-specificity mutants

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

Review: ethidium fluorescence assays. Part 1. Physicochemical studies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

A specific class of IS10 transposase mutants are blocked for target site interactions and promote formation of an excised transposon fragment

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2803%2900588-6

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1016/S0022-2836(03)00588-6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12823965%20AND%20SRC:MED&resulttype=core&format=json

5 November 2019

1 reference