(Q73712389)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12882973%20AND%20SRC:MED&resulttype=core&format=json

6 November 2019

title

Repair of UV lesions in silenced chromatin provides in vivo evidence for a compact chromatin structure (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12882973%20AND%20SRC:MED&resulttype=core&format=json

6 November 2019

author name string

Magdalena Livingstone-Zatchej

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12882973%20AND%20SRC:MED&resulttype=core&format=json

6 November 2019

Rosanna Marcionelli

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12882973%20AND%20SRC:MED&resulttype=core&format=json

6 November 2019

Kathrin Möller

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12882973%20AND%20SRC:MED&resulttype=core&format=json

6 November 2019

Remko de Pril

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12882973%20AND%20SRC:MED&resulttype=core&format=json

6 November 2019

Fritz Thoma

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12882973%20AND%20SRC:MED&resulttype=core&format=json

6 November 2019

language of work or name

English

0 references

publication date

25 July 2003

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12882973%20AND%20SRC:MED&resulttype=core&format=json

Journal of Biological Chemistry

6 November 2019

number of pages

9

1 reference

based on heuristic

inferred from page(s)

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12882973%20AND%20SRC:MED&resulttype=core&format=json

6 November 2019

volume

278

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12882973%20AND%20SRC:MED&resulttype=core&format=json

6 November 2019

issue

39

1 reference

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6 November 2019

page(s)

37471-37479

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12882973%20AND%20SRC:MED&resulttype=core&format=json

Breaking through to the other side: silencers and barriers

6 November 2019

cites work

1 reference

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The molecular biology of the SIR proteins

21 January 2018

1 reference

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Transcriptional silencing at Saccharomyces telomeres: implications for other organisms

21 January 2018

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Common themes in mechanisms of gene silencing

21 January 2018

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Position effect at S. cerevisiae telomeres: reversible repression of Pol II transcription

21 January 2018

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Silent domains are assembled continuously from the telomere and are defined by promoter distance and strength, and by SIR3 dosage

21 January 2018

1 reference

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Telomere folding is required for the stable maintenance of telomere position effects in yeast

21 January 2018

1 reference

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Limitations of silencing at native yeast telomeres

21 January 2018

1 reference

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Histone H3 and H4 N-termini interact with SIR3 and SIR4 proteins: a molecular model for the formation of heterochromatin in yeast

21 January 2018

1 reference

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Ultraviolet radiation sensitivity and reduction of telomeric silencing in Saccharomyces cerevisiae cells lacking chromatin assembly factor-I.

21 January 2018

1 reference

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SIR3 and SIR4 proteins are required for the positioning and integrity of yeast telomeres

21 January 2018

1 reference

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The histone deacetylase RPD3 counteracts genomic silencing in Drosophila and yeast

21 January 2018

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Ubiquitination of histone H2B regulates H3 methylation and gene silencing in yeast

21 January 2018

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A core nucleosome surface crucial for transcriptional silencing.

21 January 2018

1 reference

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Perinuclear localization of chromatin facilitates transcriptional silencing

21 January 2018

1 reference

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Nuclear organization and transcriptional silencing in yeast.

21 January 2018

1 reference

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The clustering of telomeres and colocalization with Rap1, Sir3, and Sir4 proteins in wild-type Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Evidence for silencing compartments within the yeast nucleus: a role for telomere proximity and Sir protein concentration in silencer-mediated repression

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Localization of yeast telomeres to the nuclear periphery is separable from transcriptional repression and telomere stability functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Molecular model for telomeric heterochromatin in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Rap1-Sir4 binding independent of other Sir, yKu, or histone interactions initiates the assembly of telomeric heterochromatin in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Histone acetylation and deacetylation in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Telomere looping permits gene activation by a downstream UAS in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Chromosomal gradient of histone acetylation established by Sas2p and Sir2p functions as a shield against gene silencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Sir2p and Sas2p opposingly regulate acetylation of yeast histone H4 lysine16 and spreading of heterochromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Transcriptional silencing in yeast is associated with reduced nucleosome acetylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Efficient transcriptional silencing in Saccharomyces cerevisiae requires a heterochromatin histone acetylation pattern

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

High-resolution structural analysis of chromatin at specific loci: Saccharomyces cerevisiae silent mating-type locus HMRa

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

High-resolution structural analysis of chromatin at specific loci: Saccharomyces cerevisiae silent mating type locus HMLalpha

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Heterochromatin organization of a natural yeast telomere. Changes of nucleosome distribution driven by the absence of Sir3p

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Saccharomyces telomeres assume a non-nucleosomal chromatin structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Telomere-proximal DNA in Saccharomyces cerevisiae is refractory to methyltransferase activity in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

SIR repression of a yeast heat shock gene: UAS and TATA footprints persist within heterochromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Chromatin structure modulates DNA repair by photolyase in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Light and dark in chromatin repair: repair of UV-induced DNA lesions by photolyase and nucleotide excision repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Genome maintenance mechanisms for preventing cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Nucleotide excision repair in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Nucleosome structure and positioning modulate nucleotide excision repair in the non-transcribed strand of an active gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Site-specific DNA repair at the nucleosome level in a yeast minichromosome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

RNA polymerase II transcription suppresses nucleosomal modulation of UV-induced (6-4) photoproduct and cyclobutane pyrimidine dimer repair in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Molecular cloning of RAD16, a gene involved in differential repair in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

The RAD7 and RAD16 genes, which are essential for pyrimidine dimer removal from the silent mating type loci, are also required for repair of the nontranscribed strand of an active gene in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Selective removal of transcription-blocking DNA damage from the transcribed strand of the mammalian DHFR gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Preferential repair of cyclobutane pyrimidine dimers in the transcribed strand of a gene in yeast chromosomes and plasmids is dependent on transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Transcription-coupled repair in RNA polymerase I-transcribed genes of yeast

21 January 2018

1 reference

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Repair of active and silenced rDNA in yeast: the contributions of photolyase and transcription-couples nucleotide excision repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

No "End of History" for photolyases

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Enzymatic photoreactivation: 50 years and counting

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Site-specific repair of cyclobutane pyrimidine dimers in a positioned nucleosome by photolyase and T4 endonuclease V in vitro

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Synthesis and nucleosome structure of DNA containing a UV photoproduct at a specific site

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Chromatin remodeling activities act on UV-damaged nucleosomes and modulate DNA damage accessibility to photolyase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

DNA repair in a yeast origin of replication: contributions of photolyase and nucleotide excision repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Poly(dA.dT) sequences exist as rigid DNA structures in nucleosome-free yeast promoters in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

DNA-repair by photolyase reveals dynamic properties of nucleosome positioning in vivo.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

RNA polymerase II transcription inhibits DNA repair by photolyase in the transcribed strand of active yeast genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Nucleotide excision repair and photolyase preferentially repair the nontranscribed strand of RNA polymerase III-transcribed genes in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Differential repair of UV damage in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Differential repair of UV damage in rad mutants of Saccharomyces cerevisiae: a possible function of G2 arrest upon UV irradiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Mapping cyclobutane-pyrimidine dimers in DNA and using DNA-repair by photolyase for chromatin analysis in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Mapping of nucleosome positions

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Protein-DNA interactions and nuclease-sensitive regions determine nucleosome positions on yeast plasmid chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Chromatin structure of the yeast URA3 gene at high resolution provides insight into structure and positioning of nucleosomes in the chromosomal context

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Yeast heterochromatin: regulation of its assembly and inheritance by histones

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Overcoming telomeric silencing: a trans-activator competes to establish gene expression in a cell cycle-dependent way.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Spreading of transcriptional repressor SIR3 from telomeric heterochromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Crystal structure of the nucleosome core particle at 2.8 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Structure of the yeast nucleosome core particle reveals fundamental changes in internucleosome interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Lysine methylation within the globular domain of histone H3 by Dot1 is important for telomeric silencing and Sir protein association

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Dot1p modulates silencing in yeast by methylation of the nucleosome core

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Disruptor of telomeric silencing-1 is a chromatin-specific histone H3 methyltransferase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Quantitative analysis of the digestion of yeast chromatin by staphylococcal nuclease

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

ATP-dependent chromatin remodeling facilitates nucleotide excision repair of UV-induced DNA lesions in synthetic dinucleosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

DNA damage in the nucleosome core is refractory to repair by human excision nuclease

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

The SWI/SNF chromatin-remodeling factor stimulates repair by human excision nuclease in the mononucleosome core particle

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Relocalization of telomeric Ku and SIR proteins in response to DNA strand breaks in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

MEC1-dependent redistribution of the Sir3 silencing protein from telomeres to DNA double-strand breaks

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

Nuclease digestion of circular TRP1ARS1 chromatin reveals positioned nucleosomes separated by nuclease-sensitive regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M306335200

21 January 2018

Identifiers

DOI

10.1074/JBC.M306335200

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12882973%20AND%20SRC:MED&resulttype=core&format=json

6 November 2019

1 reference