(Q73880037)

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Host factor titration by chromosomal R-loops as a mechanism for runaway plasmid replication in transcription termination-defective mutants of Escherichia coli

scientific article published on 01 September 2003

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7 November 2019

Host factor titration by chromosomal R-loops as a mechanism for runaway plasmid replication in transcription termination-defective mutants of Escherichia coli (English)

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Europe PubMed Central

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7 November 2019

Escherichia coli

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R Harinarayanan

1

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7 November 2019

J Gowrishankar

2

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7 November 2019

publication date

1 September 2003

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7 November 2019

Journal of Molecular Biology

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7 November 2019

332

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7 November 2019

1

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7 November 2019

31-46

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7 November 2019

D-loops and R-loops: alternative mechanisms for the initiation of chromosome replication in Escherichia coli

1 reference

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7 January 2021

Escherichia coli RecG and RecA proteins in R-loop formation.

1 reference

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7 January 2021

Overexpression of RNase H partially complements the growth defect of an Escherichia coli delta topA mutant: R-loop formation is a major problem in the absence of DNA topoisomerase I

1 reference

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7 January 2021

DNA topoisomerases regulate R-loop formation during transcription of the rrnB operon in Escherichia coli.

1 reference

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7 January 2021

Escherichia coli DNA topoisomerase I inhibits R-loop formation by relaxing transcription-induced negative supercoiling.

1 reference

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7 January 2021

R-loop-dependent hypernegative supercoiling in Escherichia coli topA mutants preferentially occurs at low temperatures and correlates with growth inhibition

1 reference

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7 January 2021

Isolation of the topB gene encoding DNA topoisomerase III as a multicopy suppressor of topA null mutations in Escherichia coli

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7 January 2021

RNase H overproduction corrects a defect at the level of transcription elongation during rRNA synthesis in the absence of DNA topoisomerase I in Escherichia coli

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7 January 2021

ColE1 replication control circuitry: sense from antisense

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7 January 2021

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7 January 2021

Mutations in a new chromosomal gene of Escherichia coli K-12, pcnB, reduce plasmid copy number of pBR322 and its derivatives.

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7 January 2021

The Escherichia coli pcnB gene promotes adenylylation of antisense RNAI of ColE1-type plasmids in vivo and degradation of RNAI decay intermediates

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7 January 2021

The RecG branch migration protein of Escherichia coli dissociates R-loops.

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7 January 2021

ATP-dependent resolution of R-loops at the ColE1 replication origin by Escherichia coli RecG protein, a Holliday junction-specific helicase

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7 January 2021

An integrated model of the transcription complex in elongation, termination, and editing

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7 January 2021

Transcription termination and anti-termination in E. coli

1 reference

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7 January 2021

Rho-dependent termination and ATPases in transcript termination

1 reference

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7 January 2021

Termination efficiency at rho-dependent terminators depends on kinetic coupling between RNA polymerase and rho

1 reference

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7 January 2021

Requirement for E. coli NusG protein in factor-dependent transcription termination

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7 January 2021

Interaction of RNA polymerase and rho in transcription termination: coupled ATPase

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7 January 2021

Amber suA mutations which relieve polarity

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7 January 2021

Correlation between the serine sensitivity and the derepressibility of the ilv genes in Escherichia coli relA- mutants

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7 January 2021

Transcriptional polarity enhances the contribution of the internal promoter, ilvEp, in the expression of the ilvGMEDA operon in wild-type Escherichia coli K12.

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7 January 2021

Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase

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7 January 2021

Mini-mu bacteriophage with plasmid replicons for in vivo cloning and lac gene fusing

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7 January 2021

Effects on mRNA degradation by Escherichia coli transcription termination factor Rho and pBR322 copy number control protein Rop.

1 reference

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7 January 2021

Genetics and sequence analysis of the pcnB locus, an Escherichia coli gene involved in plasmid copy number control

1 reference

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7 January 2021

Effects of different alleles of the E. coli K12 pol A gene on the replication of non-transferring plasmids

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7 January 2021

Mapping and sequencing of mutations in the Escherichia colirpoB gene that lead to rifampicin resistance

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7 January 2021

Allele-specific suppression of ColE1 high-copy-number mutants by a rpoB mutation of Escherichia coli.

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7 January 2021

The chromatin-associated protein H-NS.

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7 January 2021

Probing the structure, function, and interactions of the Escherichia coli H-NS and StpA proteins by using dominant negative derivatives.

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7 January 2021

Oligomerization of the chromatin-structuring protein H-NS.

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7 January 2021

H-NS oligomerization domain structure reveals the mechanism for high order self-association of the intact protein

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7 January 2021

The nucleoid-associated DNA-binding protein H-NS is required for the efficient adaptation of Escherichia coli K-12 to a cold environment

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7 January 2021

Antiterminator-dependent modulation of transcription elongation rates by NusB and NusG

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7 January 2021

Requirement for NusG for transcription antitermination in vivo by the lambda N protein

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7 January 2021

Crystal structures of transcription factor NusG in light of its nucleic acid- and protein-binding activities

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7 January 2021

Escherichia coli nusG mutations that block transcription termination by coliphage HK022 Nun protein

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7 January 2021

Escherichia coli RNA polymerase mutants that enhance or diminish the SOS response constitutively expressed in the absence of RNase HI activity

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7 January 2021

Escherichia coli CspA-family RNA chaperones are transcription antiterminators

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7 January 2021

In vivo expression from the RpoS-dependent P1 promoter of the osmotically regulated proU operon in Escherichia coli and Salmonella enterica serovar Typhimurium: activation by rho and hns mutations and by cold stress

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7 January 2021

Synthesis of linear plasmid multimers in Escherichia coli K-12.

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7 January 2021

Identification and characterization of recD, a gene affecting plasmid maintenance and recombination in Escherichia coli

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7 January 2021

Control of primer formation for ColE1 plasmid replication: conformational change of the primer transcript

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7 January 2021

Regulation of DNA superhelicity by rpoB mutations that suppress defective Rho-mediated transcription termination in Escherichia coli

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7 January 2021

Incompatibility of Escherichia coli rho mutants with plasmids is mediated by plasmid-specific transcription.

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7 January 2021

Instability of pUC19 in Escherichia coli transcription termination factor mutant, rho026

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7 January 2021

Runaway-replication plasmids as tools to produce large quantities of proteins from cloned genes in bacteria

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Quantitation of ColE1-encoded replication elements

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7 January 2021

Formation of an RNA primer for initiation of replication of ColE1 DNA by ribonuclease H

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7 January 2021

Specific cleavage of the p15A primer precursor by ribonuclease H at the origin of DNA replication

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7 January 2021

Factor-independent termination of transcription in a stretch of deoxyadenosine residues in the template DNA.

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7 January 2021

Activation of stable DNA replication in rapidly growing Escherichia coli at the time of entry to stationary phase

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7 January 2021

Multiple mechanisms for initiation of ColE1 DNA replication: DNA synthesis in the presence and absence of ribonuclease H

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7 January 2021

A structural model of transcription elongation

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7 January 2021

Ribosomal protein S4 is a transcription factor with properties remarkably similar to NusA, a protein involved in both non-ribosomal and ribosomal RNA antitermination.

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7 January 2021

Escherichia coli protein analogs StpA and H-NS: regulatory loops, similar and disparate effects on nucleic acid dynamics

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Identification of osmoresponsive genes in Escherichia coli: evidence for participation of potassium and proline transport systems in osmoregulation.

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7 January 2021

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10.1016/S0022-2836(03)00753-8

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946345%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12946345%20AND%20SRC:MED&resulttype=core&format=json

7 November 2019

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