(Q74335505)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11494848%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

title

Calculating sequence-dependent melting stability of duplex DNA oligomers and multiplex sequence analysis by graphs (English)

1 reference

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10 November 2019

2

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10 November 2019

author name string

A S Benight

1

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10 November 2019

R Owczarzy

3

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10 November 2019

P M Vallone

4

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10 November 2019

J Nesetril

5

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10 November 2019

P V Riccelli

6

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10 November 2019

publication date

1 January 2001

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10 November 2019

published in

Methods in Enzymology

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10 November 2019

volume

340

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10 November 2019

page(s)

165-192

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Thermodynamic, spectroscopic, and equilibrium binding studies of DNA sequence context effects in six 22-base pair deoxyoligonucleotides

10 November 2019

cites work

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7 January 2021

Thermodynamic, spectroscopic, and equilibrium binding studies of DNA sequence context effects in four 40 base pair deoxyoligonucleotides

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7 January 2021

DNA probes: applications of the principles of nucleic acid hybridization

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7 January 2021

Optimization of the annealing temperature for DNA amplification in vitro

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7 January 2021

Predicting sequence-dependent melting stability of short duplex DNA oligomers

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7 January 2021

High-throughput polymorphism screening and genotyping with high-density oligonucleotide arrays

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7 January 2021

Conformation and dynamics of a left-handed Z-DNA hairpin: studies of d(CGCGCGTTTTCGCGCG) in solution

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7 January 2021

Influence of base-pair changes and cooperativity parameters on the melting curves of short DNAs

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7 January 2021

Theory agrees with experimental thermal denaturation of short DNA restriction fragments

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7 January 2021

Studies of DNA dumbbells VII: evaluation of the next-nearest-neighbor sequence-dependent interactions in duplex DNA

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7 January 2021

Enthalpy and heat capacity changes for formation of an oligomeric DNA duplex: interpretation in terms of coupled processes of formation and association of single-stranded helices

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7 January 2021

Heat capacity effects on the melting of DNA. 1. General aspects.

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7 January 2021

Heat capacity effects on the melting of DNA. 2. Analysis of nearest-neighbor base pair effects

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7 January 2021

The energetics of HMG box interactions with DNA: thermodynamic description of the target DNA duplexes

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7 January 2021

The energetics of HMG box interactions with DNA: thermodynamics of the DNA binding of the HMG box from mouse sox-5

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7 January 2021

The biophysics of DNA hybridization with immobilized oligonucleotide probes.

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7 January 2021

Calculating thermodynamic data for transitions of any molecularity from equilibrium melting curves

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7 January 2021

Calorimetric determination of base-stacking enthalpies in double-helical DNA molecules

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7 January 2021

Studies of DNA dumbbells. I. Melting curves of 17 DNA dumbbells with different duplex stem sequences linked by T4 endloops: evaluation of the nearest-neighbor stacking interactions in DNA

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7 January 2021

Correlation of Tm and sequence of DNA duplexes with delta H computed by an improved empirical potential method

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7 January 2021

Allowance for heterogeneous stacking in the DNA helix-coil transition theory

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7 January 2021

Thermal denaturation of DNA molecules: A comparison of theory with experiment

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7 January 2021

An ab initio molecular orbital study on the sequence-dependency of DNA conformation: An evaluation of intra- and inter-strand stacking interaction energy

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7 January 2021

Inverted repeat sequences can influence the melting transitions of linear DNAs

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7 January 2021

Improved nearest-neighbor parameters for predicting DNA duplex stability

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7 January 2021

Improved thermodynamic parameters and helix initiation factor to predict stability of DNA duplexes

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7 January 2021

How many numbers are required to specify sequence-dependent properties of polynucleotides?

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7 January 2021

Thermodynamics and NMR of Internal G·T Mismatches in DNA

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7 January 2021

Simplification of the empirical relationship between melting temperature of DNA, its GC content and concentration of sodium ions in solution

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7 January 2021

Novel matrix descriptor for secondary structure segments in proteins: demonstration of predictability from circular dichroism spectra.

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7 January 2021

Extracting thermodynamic data from equilibrium melting curves for oligonucleotide order-disorder transitions

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7 January 2021

10.1016/S0076-6879(01)40422-8

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11494848%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

1 reference