(Q74450662)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9545425%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

title

Visualizing metal-ion-binding sites in group I introns by iron(II)-mediated Fenton reactions (English)

1 reference

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10 November 2019

author name string

C Berens

1

1 reference

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10 November 2019

B Streicher

2

1 reference

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10 November 2019

R Schroeder

3

1 reference

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10 November 2019

W Hillen

4

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10 November 2019

publication date

1 March 1998

1 reference

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10 November 2019

published in

Chemistry and Biology

1 reference

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10 November 2019

volume

5

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10 November 2019

issue

3

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10 November 2019

page(s)

163-175

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Ribozymes: a distinct class of metalloenzymes

10 November 2019

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How many catalytic RNAs? Ions and the Cheshire cat conjecture.

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7 January 2021

A crystallographic study of metal-binding to yeast phenylalanine transfer RNA

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7 January 2021

Three-dimensional structure of a hammerhead ribozyme

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7 January 2021

Capturing the structure of a catalytic RNA intermediate: the hammerhead ribozyme

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7 January 2021

Crystal structure of a group I ribozyme domain: principles of RNA packing

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7 January 2021

Metals, motifs, and recognition in the crystal structure of a 5S rRNA domain

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7 January 2021

Role of divalent metal ions in the hammerhead RNA cleavage reaction

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7 January 2021

Metal coordination sites that contribute to structure and catalysis in the group I intron from Tetrahymena.

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7 January 2021

A magnesium ion core at the heart of a ribozyme domain

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7 January 2021

Pb(II)-catalysed cleavage of the sugar–phosphate backbone of yeast tRNAPhe—implications for lead toxicity and self-splicing RNA

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7 January 2021

Identification of the magnesium, europium and lead binding sites in E. coli and lupine tRNAPhe by specific metal ion-induced cleavages

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7 January 2021

Lead cleavage sites in the core structure of group I intron-RNA.

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7 January 2021

Lead-catalyzed cleavage of ribonuclease P RNA as a probe for integrity of tertiary structure

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7 January 2021

Ionic interactions and the global conformations of the hammerhead ribozyme

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7 January 2021

Visualizing the higher order folding of a catalytic RNA molecule

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7 January 2021

The unusual conformation adopted by the adenine tracts in kinetoplast DNA

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7 January 2021

Iron(II) EDTA used to measure the helical twist along any DNA molecule

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7 January 2021

Cleavage of DNA with methidiumpropyl-EDTA-iron(II): reaction conditions and product analyses

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7 January 2021

Hydroxyl radical footprinting of calicheamicin. Relationship of DNA binding to cleavage

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7 January 2021

Defining the inside and outside of a catalytic RNA molecule

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7 January 2021

Identification of Asp258 as the metal coordinate of pigeon liver malic enzyme by site-specific mutagenesis

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7 January 2021

Proximity mapping of the Tet repressor-tetracycline-Fe2+ complex by hydrogen peroxide mediated protein cleavage.

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7 January 2021

Mapping of catalytic residues in the RNA polymerase active center

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7 January 2021

Mapping metal ions at the catalytic centres of two intron-encoded endonucleases.

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7 January 2021

Metal ion requirements for sequence-specific endoribonuclease activity of the Tetrahymena ribozyme

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7 January 2021

Tertiary Structure Around the Guanosine-Binding Site of the Tetrahymena Ribozyme

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7 January 2021

Mapping tRNA and 5S RNA tertiary structures by charge dependent Fe(II)-catalyzed cleavage.

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7 January 2021

Analysis of the role of phosphate oxygens in the group I intron from Tetrahymena

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7 January 2021

Metal ion catalysis in the Tetrahymena ribozyme reaction

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7 January 2021

Metal ion interaction with cosubstrate in self-splicing of group I introns

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7 January 2021

Effects of divalent metal ions on individual steps of the Tetrahymena ribozyme reaction

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7 January 2021

A second catalytic metal ion in group I ribozyme

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7 January 2021

Monitoring of the cooperative unfolding of the sunY group I intron of bacteriophage T4. The active form of the sunY ribozyme is stabilized by multiple interactions with 3' terminal intron components

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7 January 2021

New loop-loop tertiary interactions in self-splicing introns of subgroup IC and ID: a complete 3D model of the Tetrahymena thermophila ribozyme

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7 January 2021

Metal-binding sites in the major groove of a large ribozyme domain

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7 January 2021

Deletion-tolerance and trans-splicing of the bacteriophage T4 td intron

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7 January 2021

Antibiotic-induced oligomerisation of group I intron RNA.

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7 January 2021

Activation of the catalytic core of a group I intron by a remote 3' splice junction

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7 January 2021

Quantitative DNase footprint titration: a method for studying protein-DNA interactions

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7 January 2021

Crystallographic and biochemical investigation of the lead(II)-catalyzed hydrolysis of yeast phenylalanine tRNA

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7 January 2021

Lead-catalyzed cleavage of yeast tRNAPhe mutants.

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7 January 2021

Inhibition of the self-cleavage reaction of the human hepatitis delta virus ribozyme by antibiotics

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7 January 2021

Hydroxyl radical footprinting: a high-resolution method for mapping protein-DNA contacts

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7 January 2021

Iron(II)-ethylenediaminetetraacetic acid catalyzed cleavage of RNA and DNA oligonucleotides: similar reactivity toward single- and double-stranded forms

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7 January 2021

Three-dimensional model of Escherichia coli ribosomal 5 S RNA as deduced from structure probing in solution and computer modeling.

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7 January 2021

Modelling of the three-dimensional architecture of group I catalytic introns based on comparative sequence analysis

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7 January 2021

Involvement of a GNRA tetraloop in long-range RNA tertiary interactions

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7 January 2021

Melting and chemical modification of a cyclized self-splicing group I intron: similarity of structures in 1 M Na+, in 10 mM Mg2+, and in the presence of substrate

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7 January 2021

RNA substrate binding site in the catalytic core of the Tetrahymena ribozyme

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7 January 2021

Solution structure of a metal-binding site in the major groove of RNA complexed with cobalt (III) hexammine

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7 January 2021

Reaction of single-stranded DNA with hydroxyl radical generated by iron(II)-ethylenediaminetetraacetic acid

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2898%2990061-8

7 January 2021

Oxidative damage to DNA constituents by iron-mediated fenton reactions. The deoxyguanosine family.

1 reference

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7 January 2021

Oxidative damage to DNA constituents by iron-mediated fenton reactions. The deoxycytidine family

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7 January 2021

3'-end labeling of RNA with recombinant yeast poly(A) polymerase.

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7 January 2021

Mapping adenines, guanines, and pyrimidines in RNA

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7 January 2021

One binding site determines sequence specificity of Tetrahymena pre-rRNA self-splicing, trans-splicing, and RNA enzyme activity

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7 January 2021

New reactions of the ribosomal RNA precursor of Tetrahymena and the mechanism of self-splicing

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7 January 2021

Structural conventions for group I introns

1 reference

https://api.crossref.org/works/10.1016%2FS1074-5521%2898%2990061-8

7 January 2021

Representation of the secondary and tertiary structure of group I introns

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7 January 2021

Solvent accessible surface area and excluded volume in proteins. Analytical equations for overlapping spheres and implications for the hydrophobic effect.

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7 January 2021

10.1016/S1074-5521(98)90061-8

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9545425%20AND%20SRC:MED&resulttype=core&format=json

10 November 2019

1 reference