(Q74702566)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12206771%20AND%20SRC:MED&resulttype=core&format=json

12 November 2019

title

Computational de novo design, and characterization of an A(2)B(2) diiron protein (English)

1 reference

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12 November 2019

author name string

Christopher M Summa

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12206771%20AND%20SRC:MED&resulttype=core&format=json

12 November 2019

Michael M Rosenblatt

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12206771%20AND%20SRC:MED&resulttype=core&format=json

12 November 2019

Jae-Kyoung Hong

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12206771%20AND%20SRC:MED&resulttype=core&format=json

12 November 2019

James D Lear

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12206771%20AND%20SRC:MED&resulttype=core&format=json

12 November 2019

William F DeGrado

5

1 reference

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12 November 2019

publication date

1 August 2002

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12206771%20AND%20SRC:MED&resulttype=core&format=json

Journal of Molecular Biology

12 November 2019

number of pages

16

1 reference

based on heuristic

inferred from page(s)

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12206771%20AND%20SRC:MED&resulttype=core&format=json

12 November 2019

volume

321

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12206771%20AND%20SRC:MED&resulttype=core&format=json

12 November 2019

page(s)

923-938

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12 November 2019

issue

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12206771%20AND%20SRC:MED&resulttype=core&format=json

De novo design and structural characterization of proteins and metalloproteins

12 November 2019

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

De novo proteins from combinatorial libraries

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Construction of a family of Cys2His2 zinc binding sites in the hydrophobic core of thioredoxin by structure-based design.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Construction of new ligand binding sites in proteins of known structure

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

The rational design and construction of a cuboidal iron-sulfur protein

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Construction of a novel redox protein by rational design: conversion of a disulfide bridge into a mononuclear iron-sulfur center.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Ferredoxin and ferredoxin-heme maquettes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

A designed cavity in the hydrophobic core of a four-alpha-helix bundle improves volatile anesthetic binding affinity.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Determination of nonligand amino acids critical to [4Fe-4S]2+/+ assembly in ferredoxin maquettes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Design and synthesis of multi-haem proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Synthetic Heme−Peptide Complexes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

From synthetic coiled coils to functional proteins: automated design of a receptor for the calmodulin-binding domain of calcineurin.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Protein design of an HIV-1 entry inhibitor

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Construction of a catalytically active iron superoxide dismutase by rational protein design

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Engineering steroid 5 beta-reductase activity into rat liver 3 alpha-hydroxysteroid dehydrogenase.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Site-directed ligand discovery

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Alteration of enzyme specificity and catalysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Enzymes by design: chemogenetic assembly of transamination active sites containing lysine residues for covalent catalysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Creation of an enantioselective hydrolase by engineered substrate-assisted catalysis.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Creating lipoxygenases with new positional specificities by site-directed mutagenesis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Redesign of substrate-selectivity determining modules of glutathione transferase A1-1 installs high catalytic efficiency with toxic alkenal products of lipid peroxidation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Conversion of a catalytic into a structural disulfide bond by circular permutation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

The design of protein-based catalysts using semisynthetic methods

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Directed evolution of biocatalysts

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

How enzymes adapt: lessons from directed evolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Improved biocatalysts by directed evolution and rational protein design

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Tailoring in vitro evolution for protein affinity or stability

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Directed evolution of enzyme catalysts

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Advances in directed protein evolution by recursive genetic recombination: applications to therapeutic proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Designed evolution of enzymatic properties

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Enantioselective enzymes for organic synthesis created by directed evolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

New enzyme lineages by subdomain shuffling

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Combinatorial protein engineering by incremental truncation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Selection of beta-lactamase on filamentous bacteriophage by catalytic activity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Beyond binding: using phage display to select for structure, folding and enzymatic activity in proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

In vitro display technologies: novel developments and applications

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Selection for improved subtiligases by phage display

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Mechanism-based phage display selection of active-site mutants of human glutathione transferase A1-1 catalyzing SNAr reactions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

A method for the selection of catalytic activity using phage display and proximity coupling.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Phage display selection of peptides possessing aldolase activity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Design and use of phage display libraries for the selection of antibodies and enzymes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Use of phage display and transition-state analogs to select enzyme variants with altered catalytic properties: glutathione transferase as an example

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Proton and metal ion-dependent assembly of a model diiron protein

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Rational design of nascent metalloenzymes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Peroxidase Activity in Heme Proteins Derived from a Designed Combinatorial Library

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Biochemistry of the soluble methane monooxygenase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

MMO: P450 in wolf's clothing?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Dioxygen Activation by Enzymes Containing Binuclear Non-Heme Iron Clusters

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Protein Radicals in Enzyme Catalysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Harnessing free radicals: formation and function of the tyrosyl radical in ribonucleotide reductase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Engineering delta 9-16:0-acyl carrier protein (ACP) desaturase specificity based on combinatorial saturation mutagenesis and logical redesign of the castor delta 9-18:0-ACP desaturase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

7 January 2021

Dioxygen and Hemerythrin

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

The structure of Desulfovibrio vulgaris rubrerythrin reveals a unique combination of rubredoxin-like FeS4 and ferritin-like diiron domains

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Structural and functional diversity in 4-α-helical proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Tertiary templates for the design of diiron proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Rational reprogramming of the R2 subunit of Escherichia coli ribonucleotide reductase into a self-hydroxylating monooxygenase.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

O2 activation by non-heme diiron proteins: identification of a symmetric mu-1,2-peroxide in a mutant of ribonucleotide reductase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Retrostructural analysis of metalloproteins: application to the design of a minimal model for diiron proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Characterization of a new four-chain coiled-coil: influence of chain length on stability

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Design of heterotetrameric coiled coils: evidence for increased stabilization by Glu(-)-Lys(+) ion pair interactions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

The de novo design of protein structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Optimal sequence selection in proteins of known structure by simulated evolution

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Controlling topology and native-like behavior of de novo-designed peptides: design and characterization of antiparallel four-stranded coiled coils

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

De novo design of helical bundles as models for understanding protein folding and function.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Design and NMR analyses of compact, independently folded BBA motifs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Protein design, a minimalist approach.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

D(n)-symmetrical tertiary templates for the design of tubular proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Carbonic Anhydrase: Evolution of the Zinc Binding Site by Nature and by Design

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Perturbations to the active site of phosphotriesterase.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Secondary ligands enhance affinity at a designed metal-binding site

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

The Asp-His-Fe triad of cytochrome c peroxidase controls the reduction potential, electronic structure, and coupling of the tryptophan free radical to the heme

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

A thermodynamic scale for the helix-forming tendencies of the commonly occurring amino acids

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

A buried polar interaction can direct the relative orientation of helices in a coiled coil

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Charge compensated binding of divalent metals to bacterioferritin: H+ release associated with cobalt(II) and zinc(II) binding at dinuclear metal sites

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Recent Advances in Zinc Enzymology

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Zinc-dependent protein folding

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Analysis and design of three-stranded coiled coils and three-helix bundles.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Spectroscopic studies of cobalt(II) binding to Escherichia coli bacterioferritin.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Structure of a unique twofold symmetric haem-binding site

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Hydrogen peroxide formation during iron deposition in horse spleen ferritin using O2 as an oxidant

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Direct spectroscopic and kinetic evidence for the involvement of a peroxodiferric intermediate during the ferroxidase reaction in fast ferritin mineralization.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Dinuclear center of ferritin: studies of iron binding and oxidation show differences in the two iron sites.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Reaction paths of iron oxidation and hydrolysis in horse spleen and recombinant human ferritins.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

The iron oxidation and hydrolysis chemistry of Escherichia coli bacterioferritin.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Mechanism of assembly of the tyrosyl radical-dinuclear iron cluster cofactor of ribonucleotide reductase.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Resonance Raman evidence for an Fe-O-Fe center in stearoyl-ACP desaturase. Primary sequence identity with other diiron-oxo proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

De novo design of the hydrophobic cores of proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

De novo protein design: fully automated sequence selection

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Engineering of stable and fast-folding sequences of model proteins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

Raster3D: photorealistic molecular graphics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-2836%2802%2900589-2

10.1016/S0022-2836(02)00589-2

7 January 2021

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12206771%20AND%20SRC:MED&resulttype=core&format=json

12 November 2019

1 reference