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The architectural organization and mechanistic function of group II intron structural elements
scientific article published on 01 June 1998
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scholarly article
1 reference
stated in
Europe PubMed Central
PubMed publication ID
9666325
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9666325%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
review article
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Europe PubMed Central
title
The architectural organization and mechanistic function of group II intron structural elements
(English)
1 reference
stated in
Europe PubMed Central
PubMed publication ID
9666325
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9666325%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
author name string
P Z Qin
series ordinal
1
1 reference
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Europe PubMed Central
PubMed publication ID
9666325
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9666325%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
A M Pyle
series ordinal
2
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stated in
Europe PubMed Central
PubMed publication ID
9666325
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9666325%20AND%20SRC:MED&resulttype=core&format=json
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13 November 2019
publication date
1 June 1998
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Europe PubMed Central
PubMed publication ID
9666325
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9666325%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
published in
Current Opinion in Structural Biology
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stated in
Europe PubMed Central
PubMed publication ID
9666325
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9666325%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
volume
8
1 reference
stated in
Europe PubMed Central
PubMed publication ID
9666325
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9666325%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
issue
3
1 reference
stated in
Europe PubMed Central
PubMed publication ID
9666325
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9666325%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
page(s)
301-308
1 reference
stated in
Europe PubMed Central
PubMed publication ID
9666325
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9666325%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
cites work
Homing of a group II intron from Lactococcus lactis subsp. lactis ML3.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Group II intron from Pseudomonas alcaligenes NCIB 9867 (P25X): entrapment in plasmid RP4 and sequence analysis
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A tripartite group II intron in mitochondria of an angiosperm plant
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The mitochondrial LSU rDNA of the brown alga Pylaiella littoralis reveals alpha-proteobacterial features and is split by four group IIB introns with an atypical phylogeny
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Group II intron endonucleases use both RNA and protein subunits for recognition of specific sequences in double-stranded DNA.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Nuclear mutations that block group II RNA splicing in maize chloroplasts reveal several intron classes with distinct requirements for splicing factors
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Splicing and intron-internal RNA editing of trnK-matK transcripts in barley plastids: support for MatK as an essential splice factor
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The reverse-transcriptase-like proteins encoded by group II introns in the mitochondrial genome of the brown alga Pylaiella littoralis belong to two different lineages which apparently coevolved with the group II ribosyme lineages
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A multitude of suppressors of group II intron-splicing defects in yeast
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Efficient integration of an intron RNA into double-stranded DNA by reverse splicing
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identification of splicing signals in introns of yeast mitochnodrial split genes: mutational alterations in intron bI 1 and secondary structures in related introns
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Comparison of fungal mitochondrial introns reveals extensive homologies in RNA secondary structure
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Structural Analysis of a Group II Intron by Chemical Modifications and Minimal Energy Calculations
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Catalytic site components common to both splicing steps of a group II intron
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Comparative and functional anatomy of group II catalytic introns--a review
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Conserved sequences and structures of group I introns: building an active site for RNA catalysis--a review
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Stereochemical selectivity of group II intron splicing, reverse splicing, and hydrolysis reactions
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
An RNA conformational change between the two chemical steps of group II self-splicing.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
An independently folding domain of RNA tertiary structure within the Tetrahymena ribozyme
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Group II intron domain 5 facilitates a trans-splicing reaction
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Kinetic analysis of the 5' splice junction hydrolysis of a group II intron promoted by domain 5.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Building a kinetic framework for group II intron ribozyme activity: quantitation of interdomain binding and reaction rate
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Conversion of a group II intron into a new multiple-turnover ribozyme that selectively cleaves oligonucleotides: elucidation of reaction mechanism and structure/function relationships
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Domain 5 interacts with domain 6 and influences the second transesterification reaction of group II intron self-splicing
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Mobility of yeast mitochondrial group II introns: engineering a new site specificity and retrohoming via full reverse splicing
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Group II introns deleted for multiple substructures retain self-splicing activity
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The phylogenetically predicted base-pairing interaction between alpha and alpha' is required for group II splicing in vitro
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Structure and activities of group II introns
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Base-pairing interactions involving the 5' and 3'-terminal nucleotides of group II self-splicing introns
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Multiple exon-binding sites in class II self-splicing introns
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Stopped-flow fluorescence spectroscopy of a group II intron ribozyme reveals that domain 1 is an independent folding unit with a requirement for specific Mg2+ ions in the tertiary structure
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Sequence specificity of a group II intron ribozyme: multiple mechanisms for promoting unusually high discrimination against mismatched targets
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Trans-activation of group II intron splicing by nuclear U5 snRNA.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Restoration of the self-splicing activity of a defective group II intron by a small trans-acting RNA.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Multiple tertiary interactions involving domain II of group II self-splicing introns.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Group II intron ribozymes that cleave DNA and RNA linkages with similar efficiency, and lack contacts with substrate 2'-hydroxyl groups
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identification of structural elements critical for inter-domain interactions in a group II self-splicing intron
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Evolutionary relationships among group II intron-encoded proteins and identification of a conserved domain that may be related to maturase function
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Catalytic role of 2'-hydroxyl groups within a group II intron active site
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Ribozyme catalysis from the major groove of group II intron domain 5.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Studies of point mutants define three essential paired nucleotides in the domain 5 substructure of a group II intron
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Catalytically critical nucleotide in domain 5 of a group II intron
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Two competing pathways for self-splicing by group II introns: a quantitative analysis of in vitro reaction rates and products
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Group II intron splicing in vivo by first-step hydrolysis
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Branch-site selection in a group II intron mediated by active recognition of the adenine amino group and steric exclusion of non-adenine functionalities
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Length changes in the joining segment between domains 5 and 6 of a group II intron inhibit self-splicing and alter 3' splice site selection
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Frequent use of the same tertiary motif by self-folding RNAs
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Crystal structure of a group I ribozyme domain: principles of RNA packing
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Remarkable morphological variability of a common RNA folding motif: the GNRA tetraloop-receptor interaction
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A group II self-splicing intron from the brown alga Pylaiella littoralis is active at unusually low magnesium concentrations and forms populations of molecules with a uniform conformation
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Interaction of intronic boundaries is required for the second splicing step efficiency of a group II intron.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0959-440X%2898%2980062-6
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1016/S0959-440X(98)80062-6
1 reference
stated in
Europe PubMed Central
PubMed publication ID
9666325
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9666325%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
PubMed publication ID
9666325
1 reference
stated in
Europe PubMed Central
PubMed publication ID
9666325
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9666325%20AND%20SRC:MED&resulttype=core&format=json
retrieved
13 November 2019
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