(Q77210975)

English

Chemical shift as a probe of molecular interfaces: NMR studies of DNA binding by the three amino-terminal zinc finger domains from transcription factor IIIA

scientific article published on 01 July 1998

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scholarly article

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3 December 2019

Chemical shift as a probe of molecular interfaces: NMR studies of DNA binding by the three amino-terminal zinc finger domains from transcription factor IIIA (English)

1 reference

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3 December 2019

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author name string

M P Foster

1

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3 December 2019

D S Wuttke

2

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3 December 2019

K R Clemens

3

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3 December 2019

W Jahnke

4

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3 December 2019

I Radhakrishnan

5

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3 December 2019

L Tennant

6

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3 December 2019

M Reymond

7

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3 December 2019

J Chung

8

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3 December 2019

P E Wright

9

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3 December 2019

publication date

1 July 1998

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3 December 2019

Journal of Biomolecular NMR

1 reference

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3 December 2019

12

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3 December 2019

1

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3 December 2019

51-71

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3 December 2019

https://scigraph.springernature.com/pub.10.1023/a:1008290631575

0 references

1H, 13C and 15N chemical shift referencing in biomolecular NMR

1 reference

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Identification by NMR of the binding surface for the histidine-containing phosphocarrier protein HPr on the N-terminal domain of enzyme I of the Escherichia coli phosphotransferase system.

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Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons

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NMRPipe: a multidimensional spectral processing system based on UNIX pipes

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Calculation of protein structures with ambiguous distance restraints. Automated assignment of ambiguous NOE crosspeaks and disulphide connectivities.

1 reference

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12 December 2020

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1H, 15N and 13C resonance assignments for the first three zinc fingers of transcription factor IIIA.

1 reference

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12 December 2020

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A pulsed field gradient isotope-filtered 3D 13C HMQC-NOESY experiment for extracting intermolecular NOE contacts in molecular complexes.

1 reference

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An NMR study of polymorphous behaviour of the mismatched DNA octamer d(m5C-G-m5C-G-A-G-m5C-G) in solution. The B-duplex and hairpin forms

1 reference

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Heteronuclear filters in two-dimensional [1H,1H]-NMR spectroscopy: combined use with isotope labelling for studies of macromolecular conformation and intermolecular interactions

1 reference

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A specific transcription factor that can bind either the 5S RNA gene or 5S RNA

1 reference

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NMR chemical shift perturbation mapping of DNA binding by a zinc-finger domain from the yeast transcription factor ADR1

1 reference

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12 December 2020

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Solution structure of the first three zinc fingers of TFIIIA bound to the cognate DNA sequence: determinants of affinity and sequence specificity

1 reference

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Coupling of local folding to site-specific binding of proteins to DNA

1 reference

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Solution structure of the Ras-binding domain of c-Raf-1 and identification of its Ras interaction surface

1 reference

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Contribution of individual base pairs to the interaction of TFIIIA with the Xenopus 5S RNA gene

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Zinc Finger Domains: Hypotheses and Current Knowledge

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The solution structure of HIV-1 Nef reveals an unexpected fold and permits delineation of the binding surface for the SH3 domain of Hck tyrosine protein kinase

1 reference

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12 December 2020

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Mapping of the binding interfaces of the proteins of the bacterial phosphotransferase system, HPr and IIAglc

1 reference

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12 December 2020

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Simultaneous 13C and 15N isotope editing of biomolecular complexes. Application to a mutant lac repressor headpiece DNA complex

1 reference

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12 December 2020

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Amino acid type determination in the sequential assignment procedure of uniformly 13C/15N-enriched proteins.

1 reference

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12 December 2020

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The 13C chemical-shift index: a simple method for the identification of protein secondary structure using 13C chemical-shift data

1 reference

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Mapping of the sites of protection on a 5 S RNA gene by the Xenopus transcription factor IIIA. A model for the interaction

1 reference

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Correlation between dynamics and high affinity binding in an SH2 domain interaction

1 reference

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12 December 2020

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Definition of the binding sites of individual zinc fingers in the transcription factor IIIA-5S RNA gene complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/9729788

12 December 2020

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Specific interaction of a purified transcription factor with an internal control region of 5S RNA genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/9729788

12 December 2020

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Xenopus 5S gene transcription factor, TFIIIA: Characterization of a cDNA clone and measurement of RNA levels throughout development

1 reference

https://pubmed.ncbi.nlm.nih.gov/9729788

12 December 2020

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Zinc finger-DNA recognition: crystal structure of a Zif268-DNA complex at 2.1 A

1 reference

https://pubmed.ncbi.nlm.nih.gov/9729788

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Chemical shifts as a tool for structure determination

1 reference

https://pubmed.ncbi.nlm.nih.gov/9729788

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The chemical shift index: a fast and simple method for the assignment of protein secondary structure through NMR spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/9729788

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Structure of the TFIIIA-5 S DNA complex

1 reference

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The crystal structure of a two zinc-finger peptide reveals an extension to the rules for zinc-finger/DNA recognition

1 reference

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Linkage of protein assembly to protein-DNA binding.

1 reference

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Association of a 5S gene transcription factor with 5S RNA and altered levels of the factor during cell differentiation

1 reference

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Protein-mediated nuclear export of RNA: 5S rRNA containing small RNPs in xenopus oocytes

1 reference

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The NMR determination of the IIA(mtl) binding site on HPr of the Escherichia coli phosphoenol pyruvate-dependent phosphotransferase system

1 reference

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Cocrystal structure of YY1 bound to the adeno-associated virus P5 initiator

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Crystal structure of a five-finger GLI-DNA complex: new perspectives on zinc fingers

1 reference

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TFIIIA: nine fingers--three hands?

1 reference

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Discovering high-affinity ligands for proteins: SAR by NMR

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Long-range motional restrictions in a multidomain zinc-finger protein from anisotropic tumbling.

1 reference

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Repetitive zinc-binding domains in the protein transcription factor IIIA from Xenopus oocytes

1 reference

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Field gradient techniques in NMR spectroscopy

1 reference

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Specific interaction of the first three zinc fingers of TFIIIA with the internal control region of the Xenopus 5 S RNA gene.

1 reference

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Identification of the Contact Surface of a Streptococcal Protein G Domain Complexed with a Human Fc Fragment

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1 reference

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A 2.2 A resolution crystal structure of a designed zinc finger protein bound to DNA

1 reference

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Zif268 protein-DNA complex refined at 1.6 A: a model system for understanding zinc finger-DNA interactions

1 reference

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1 reference

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1 reference

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